Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq8561 131 1e-25 seq236 91.5 1e-13 >seq8561 Length=961 Score = 131 bits (144), Expect = 1e-25 Identities = 209/295 (71%), Gaps = 5/295 (2%) Strand=Plus/Minus Query 95561 CCCACGGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCACCCTCGTCC 95620 |||| ||| ||| | | |||||||| || ||||||| || || || || Sbjct 683 CCCATCGGCGAGAACAGCGCGTCACCCTGACCGATGAGCTTGTCCGCCCCGGGGCTATCG 624 Query 95621 AGGATCACCCGGCTATCGGTGAGTGATGCTGT-GGCGAACGAGAGCCTAGACGGCACGTT 95679 ||||| || ||||| ||||||| || || |||||| | || | |||||| ||||| Sbjct 623 AGGATGACGCGGCTGTCGGTGACAC-TGGTGACGGCGAAGGCCAGTCGAGACGGGACGTT 565 Query 95680 GGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATG 95739 | ||||| || || ||||| || || ||| |||||||| ||||| |||||||| || Sbjct 564 CGCCTTGATGAGTCCGGTGACGACGTCGACGCTCGGCCGCTGGGTCGCGAGGACGAGGTG 505 Query 95740 AATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTT 95799 ||||||| || ||||| ||| | |||||| || || | |||| || || | Sbjct 504 GATGCCGGAGGCTCGCGCGAGCTGCGTGATGCGCACGATCGAGTCCTCCACGTCG--CGA 447 Query 95800 GTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTAGGGG 95854 | || | ||||||||||||| || |||||||||||||| |||| || ||| ||| Sbjct 446 GGGGC-GACCATCATGAGGTCGGCGAGCTCGTCGACCACGACCAGGAGGTACGGG 393 >seq236 Length=280360 Score = 91.5 bits (100), Expect = 1e-13 Identities = 192/285 (67%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 95872 GTGGCGCACGCCGGCTTCCTGCATCTGCCGGTACCGGTCATCCATCTCC---ACGGTGAG 95928 || |||||||||| | | ||||| ||||| ||||| ||||||||| ||||| Sbjct 83377 GTTGCGCACGCCGACCTTGGACATCTTGCGGTAGCGGTCTTCCATCTCCTTGACGGT--- 83433 Query 95929 CCACCGCAGCGTCTTAACCGCCTCGTCGGGCTCGGTGACCACCGGCTGCAAAAGGTGGGG 95988 ||| ||||| || |||| | || ||||| || || ||| | || || || Sbjct 83434 CCATTTCAGCGCTACGACGGCCTTCTTCGGATCGGTCACGACGGGCGTGAGCAGATGCGG 83493 Query 95989 GATACCGTTGTATGGGGTGAGTTCCACCATCTTCGGGTCGATCATGATGAGCTTGACCCG 96048 || |||| || | ||||||| ||||||||| ||||||||||| || | | | Sbjct 83494 AATGCCGTCATAGATCGACAGTTCCAGCATCTTCGGATCGATCATGATCAGGCGGCACTG 83553 Query 96049 ATCAGGATTGGCTCGGTAGAGCATGGAAACCAGCATCGAGTTGATGAAGCTGGACTTGCC 96108 || || | ||||| |||| || | | ||| | ||||||| ||| || || Sbjct 83554 TTCCGGGGTCATGCGGTAAAGCAGCGACAGGATCATGGTGTTGATGGCAACGGATTTACC 83613 Query 96109 CGATCCGGTGGCGCCAGCCACCAGCAGGTGGGGCATTTTGGCCAG 96153 ||| ||||||| || || |||||||| || ||||| || ||||| Sbjct 83614 CGAGCCGGTGGTACCTGCAACCAGCAGATGCGGCATCTTCGCCAG 83658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351689832449942