Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq32 178 2e-38 seq2491 145 1e-28 seq1758 145 1e-28 seq915 118 2e-20 seq1306 104 4e-16 seq2141 89.7 8e-12 seq1625 86.0 1e-10 >seq32 Length=13759 Score = 178 bits (196), Expect = 2e-38 Identities = 197/263 (75%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 |||||||||||||| || |||||||| || || ||||||||||| || || |||||||| Sbjct 4169 TGGTCGACATAGCGGGCAGTGTCGTTGAACACACGGAGCATGGGGACTAGACCGTTGGAG 4228 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 |||||||||||| | ||||| || | || || | ||||||| | |||| ||| Sbjct 4229 GTGCCGTTGGTGCCGCGGATGTAGGAGCGGGCAGCACGGATCTTGTGCACAGCAATGCCA 4288 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 ||||| || || | |||||||||||| || || | || || || |||||||| |||||| Sbjct 4289 ATGCCTCCAGCAGACTTGGAGATGAGAGCACATTGCTTGAGTGTGTCGTAGATACCCTCG 4348 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || |||||| ||||||| | | || ||||| || || | || || | ||||| Sbjct 4349 ATGGAGTCGTCCTTCATTTGGACGAGGAAGCAGGAGGACATCTGGGGATAGGGGGTGCCA 4408 Query 2073781 GCATTGAAGAGCGTGGGCGTCGC 2073803 |||||||| || ||||| || || Sbjct 4409 GCATTGAACAGGGTGGGAGTGGC 4431 Score = 107 bits (118), Expect = 3e-17 Identities = 335/510 (66%), Gaps = 28/510 (5%) Strand=Plus/Plus Query 2069251 TGGTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCG 2069310 || ||||| || || |||||||| | ||| || | || || | || |||||||||||| Sbjct 2747 TGATCGACAGTGAATTGGATGGCATCGGCAGCGGCACGAGTTCTCAAATAGTACATGCCA 2806 Query 2069311 GTCTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATGGACTCGGCA---TTC 2069367 ||||| || || ||| |||||| |||||| || |||| || |||| || Sbjct 2807 GTCTTAAGACCCTTCTTCCATGCGTAGAAGTGCATTGAGGTGAG---CTTGGCAAAGTTG 2863 Query 2069368 GGGACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCC 2069427 || ||||| ||| ||||| ||||| || |||| ||| | || ||||| Sbjct 2864 GGCTCGGCAATAAAGACGTTGAATGACTGTGATTGATCGATGAAGGCACCACGATCGGCA 2923 Query 2069428 GCCATGTCGATGGTCACGCGGTTGGAC--ACCTCCCACACGGTCTTGAACAGGGCCTTGA 2069485 |||||||| ||| || |||| || | |||||| || |||||| ||| |||| | Sbjct 2924 GCCATGTCAATGAG-ACTACGTTG-ACGGATCTCCCAGACAGTCTTGTACAACTCCTTCA 2981 Query 2069486 GATGCGGCGGCA--CCTCGTCGTCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGAG 2069543 | | || | ||| || | | ||| | || || | ||||||| Sbjct 2982 AGTCCTCGGGGATGCCTGGT--------ACGTTCTGGATGGAACCACGGTTGGCGATGAT 3033 Query 2069544 GCGGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGG---TG 2069600 | ||| | || || ||||||| ||| | ||||| | | ||| | || || Sbjct 3034 GTGGTTCTTCATCTCTGGGGTCCACAAGCCAAGGGCCATGA---GATCGGCAAGCAACTG 3090 Query 2069601 GCGGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTG-A 2069659 |||||| ||||| || || || | | ||| || || | |||||||||| ||| | Sbjct 3091 CTTGTTGACGACGGTGAACTCTCCAGCCAACACACGACGAGAGTAGATGTTGGAGGTGTA 3150 Query 2069660 TGACCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCG 2069719 || | ||| | |||| ||||||| ||||||||||| || | ||| ||||||||| | | Sbjct 3151 TGGC-TCGAAGCACTCGTTGTTGCCGAGGATCTGCGAGGTTGAGGCAGTGGGCATGGGGG 3209 Query 2069720 CCACGAGCAGCGAGTTGCGCAGGCCGTACT 2069749 | | ||||| |||||||| || |||| || Sbjct 3210 CAATGAGCAAGGAGTTGCGGAGACCGTTCT 3239 Score = 105 bits (116), Expect = 1e-16 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 |||| ||| | || || | || || || || |||||||||||||||||||||| | Sbjct 4032 TCCAGAGGGCATAGAACAAGTCACGAGCACGCATCTCCTCCTTGCCGTGGTTCTTGCGGA 4091 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 ||||||| | || | || |||||||||||| ||||| |||||| ||||| || |||| Sbjct 4092 GGTCGAGGAACTCAAAGACGTCGGCGTGCCATGGCTCGAGGTAGACTGCAAATGCACCCT 4151 Query 2071997 TGCGCTTGCCGCCGCC 2072012 ||||||| ||||| || Sbjct 4152 TGCGCTTTCCGCCACC 4167 >seq2491 Length=10632 Score = 145 bits (160), Expect = 1e-28 Identities = 222/312 (71%), Gaps = 11/312 (4%) Strand=Plus/Minus Query 794356 ATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATG 794415 ||||| || || |||||| || || ||||| ||||| | || || | ||| ||||| Sbjct 4536 ATCAACTCATTACTAAAGGTTAGCCCTGGCATCAGGCCTCTTTTTTTCAACCAGAAGATC 4477 Query 794416 GCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC-AAAGCCGACGAGCCGCTC 794474 | |||||| || || ||| || ||||| || || ||||| |||||| || | || || Sbjct 4476 GAACAGAAGCTCCCGCTGAAGAAAATGCCTTCCACTGCGGCGAAAGCC-ACCAAACGTTC 4418 Query 794475 GGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCT 794534 ||||||| | ||| |||||| ||||| || ||||| ||||| |||||| | Sbjct 4417 GGCAAAATT-TCC--GCCCTCA------ATCCAGCGCAATGCCCATTCTGCTTTTTTCTT 4367 Query 794535 CACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGAC 794594 || | || ||||| || | ||| | || || ||| || || | || || || | Sbjct 4366 TACACAAGGAACCGTCTCTACGGCATGGAACAGCCTGTCTTTTTCTTCAGGATCTTTAAT 4307 Query 794595 GTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAA 794654 ||||| ||||| || |||| ||||| || |||||||||||||| || ||||||||| Sbjct 4306 ATAGGTATCGATCAGCAGCGCATAGGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAA 4247 Query 794655 GCCATAAAAGCA 794666 ||||||||| || Sbjct 4246 GCCATAAAAACA 4235 >seq1758 Length=7412 Score = 145 bits (160), Expect = 1e-28 Identities = 247/346 (71%), Gaps = 18/346 (5%) Strand=Plus/Plus Query 2019104 CGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAAT 2019163 |||||| || ||| || ||||| || ||||| ||| | ||||| ||||| | Sbjct 6628 CGAGGCTGTCTACGAGCTGAATGCCTCGGACGACCGCACGCTCGACGTGGTGCGCGACAA 6687 Query 2019164 CATCAAGCATCACGCTTCGAAAAGAATC----GAC-CTGCCGCCCGGCCGCCACAAGGTG 2019218 |||||| ||| |||| |||| | ||| ||||| ||||| || |||||| | Sbjct 6688 GATCAAG----ACG-TTCGCAAAGCAGAAGGTGACACTGCCACCCGGACGACACAAGATC 6742 Query 2019219 ATCATCCTCGATGAGGCCGACTGC-CTTACGTCGGCGGCCCAGCAGGCCCTCCGATCG-A 2019276 |||||||||||||||||||| ||| | ||||||| || |||||||| || || ||| | Sbjct 6743 ATCATCCTCGATGAGGCCGA-TGCAATGACGTCGGGCGCACAGCAGGCGCTTCG-TCGCA 6800 Query 2019277 CCATGGAAAAGTACAC-CAAC-ACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGAT 2019334 |||||| | ||||| | | || || || || || |||||||||||||||||| | | Sbjct 6801 TCATGGAGA--TACACTCGGCAACCACCCGTTTCGCACTGGCCTGCAACACGTCGACCAA 6858 Query 2019335 GGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGC 2019394 | ||||||| || | ||| || ||||| | ||||||| |||| ||| | ||||| Sbjct 6859 GATCATCGAGCCCATTCAGTCGCGGTGCGCAGTGCTGCGCTTCACGCGACTCTCGGACGC 6918 Query 2019395 CCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440 ||||||| | ||| || ||| | |||| ||| || |||||| Sbjct 6919 ACAGATCGTCAAGCGCCTCAAAGAGGTAATCGTCGCGGAGAAGGTC 6964 >seq915 Length=13476 Score = 118 bits (130), Expect = 2e-20 Identities = 212/303 (70%), Gaps = 24/303 (8%) Strand=Plus/Minus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 |||||||||||||||||||| ||||||||||| ||||||||| ||| ||||||| Sbjct 554 CTCGAAAAAGTTGGTCTTGCGAATGAGCGAGATCATCTCCATCCAGTCGAATGGGTTGGT 495 Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGG---CGGTCGGCGACGAATTC 794041 | |||| ||||| | | ||||| ||||| ||| || ||||| || || Sbjct 494 AGAGTTGTAGATCTTCTTGTATCCGAG---GGCAAGGAGGAGACGATCGGCACAAAACTC 438 Query 794042 AATGTACTGGCACATGAGGGCGGC-GTTCATGCCGATGAGCGCCACGGGCAGCGACTCGC 794100 |||||||| ||||| | ||| | ||||||||| ||||| | || || || || | | Sbjct 437 GATGTACTGTGACATG-GAGCGACTGTTCATGCCAATGAGATCGACAGGGAGTGATTGGG 379 Query 794101 TGACAAACTCTTTCTCGATCTCGACGGCCTCG---ATGATGATCT-----GCCTGGGCAC 794152 ||| |||||| ||||| ||| || || ||| |||||| || | | |||| Sbjct 378 TGATAAACTCCTTCTCACACTCTACAGCATCGCGAATGATGGACTCGAGAGTGTTGGCA- 320 Query 794153 GTCGGACGACGGCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAG 794212 ||| |||| || ||| ||| | ||||||||| ||||||||||| || || || Sbjct 319 -TCG--AGACG----GTTGACAAGCTTGCTGTAGAGCAAACAGGCAAAGTCACAGTGAAG 267 Query 794213 ACC 794215 ||| Sbjct 266 ACC 264 Score = 116 bits (128), Expect = 6e-20 Identities = 158/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| |||||||| | ||||| || | |||||||| | ||| ||||| Sbjct 266 ACCCTCGTCACGACTGATGAGCTCGTTAGAGAATGTCAATCCGGGCATCAAGCCACGCTT 207 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||||||||||| ||||| || || ||||||||| ||||| || || ||||| Sbjct 206 CTTGAGCCAAAAGATGGAGCAGAAGCTACCACTGAAAAAGATACCCTCTACAGCTGCAAA 147 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | |||| | ||||| ||||| || | || ||| | ||||| |||| ||||| Sbjct 146 GGCGACCAAACGCTCAGCAAA--TGACTTGG----AGTTGGTAATCCATCTCATAGCCCA 93 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGC 794558 ||| ||||| ||| | || | || | || |||||||| Sbjct 92 CTCAGCCTTCTTCTTTACACATGGAATGGTCTCGATGGC 54 >seq1306 Length=10203 Score = 104 bits (114), Expect = 4e-16 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 2035560 AAGGACGACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGAC 2035619 ||||| || ||||| || || || | || |||||| | || ||| ||||||| Sbjct 7458 AAGGATGAGAAGCGTTTGGATGATATCCCACCCTGGGACCGTGAGTTCTGCAAGGTCGAT 7399 Query 2035620 CAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTC 2035679 ||||| |||||||| ||| | ||| | || |||||||| | ||||||||||| || ||| Sbjct 7398 CAACCAACCCTCTTCGAGCTCATCTTGGCTGCCAACTATTTGGACATCAAGCCACTTCTC 7339 Query 2035680 GATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGC 2035739 ||| | |||||||| || ||||| | ||| || ||| | || ||||| || | Sbjct 7338 GATGTTACTTGCAAGACTGTCGCCAATATGATCCGTGGTAAGACACCAGAGGAGATTAGA 7279 Query 2035740 AAGACCTTTAACATCAAGTACG 2035761 |||| || ||||| ||| ||| Sbjct 7278 AAGATTTTCAACATTAAGAACG 7257 >seq2141 Length=1138 Score = 89.7 bits (98), Expect = 8e-12 Identities = 151/218 (69%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 ||||| || || || || | ||||||||| |||||| | | ||||| ||||||| Sbjct 119 AAACATCTAGCTTCAGGGATTTGGACCTCTGACATGAATCTGGTGGCCAAGTTCTCATTG 178 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 ||||| || || ||||| || || || || | ||||| | ||||||||||| || | | Sbjct 179 ACGATACCATCACTGGCAGCAAAGAAAGCCAAGACGTTTGTAATAAAGTGACGTTCATTG 238 Query 796261 TCGCTGAGCGAG---ACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTC 796317 || ||||| | |||| | | |||| | ||||| | |||||| || ||| Sbjct 239 TCATTGAGCTTGTTCTCCCATTCGTTGATGTCACTTGCAAGGTCTATCTCCTCTGCAGTC 298 Query 796318 CAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATAT 796355 |||||| || || ||||| ||||| | | |||||| Sbjct 299 CAAAAGCTTGCTTCAGCCTTCTTGTAGAGATTCCATAT 336 >seq1625 Length=8199 Score = 86.0 bits (94), Expect = 1e-10 Identities = 145/207 (70%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 1217395 TGCACCGCGACCTCAAGAGCAGCAACCTGTTGGTCGACGACAATTTCACGATCAAGGTGG 1217454 |||| |||||| | ||| | |||||| ||||||||||| | | | | ||||||||| Sbjct 7954 TGCATCGCGACTTGAAGTCCCACAACCTCTTGGTCGACGAGACATGGAAGGTCAAGGTGG 7895 Query 1217455 CCGACTTTGGCTTTGCCCGCATCCGCG-AGGACAATGCGACGATGACCCGGTGCGGCACG 1217513 | |||||||| | || || || | ||| || || ||||| ||| ||||| Sbjct 7894 CTGACTTTGG-TCTGAGTACAATCGAGCAGGCTAAC---ACCATGACTGCGTGTGGCACA 7839 Query 1217514 CCGGCGTGGACGGCGCCCGAGATCCTGCGCGGCGAGCGCTACTCGGAAAAGGCCGACATC 1217573 || ||||| || ||||| | || ||| | || | ||| | || ||||| || || Sbjct 7838 CCTTGTTGGACAGCACCCGAAGTGCTCCGCAACCAGAGATACACCGATAAGGCTGATGTC 7779 Query 1217574 TACTCTTTCGGCATCGTCATGTGGGAG 1217600 ||||| |||| ||| |||||||||||| Sbjct 7778 TACTCATTCGCCATTGTCATGTGGGAG 7752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914822895624698