Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_022343.1 Length=159991 Score E Sequences producing significant alignments: (Bits) Value seq232 86.0 6e-12 >seq232 Length=384298 Score = 86.0 bits (94), Expect = 6e-12 Identities = 201/300 (67%), Gaps = 5/300 (2%) Strand=Plus/Plus Query 143924 GACACCAACCCTGCTCTGGACTTCGTTGAAGAGTATTATGGCGCGGATATCGATGAAGAC 143983 || |||| || || | || ||| | ||||| |||||| ||| || || |||| Sbjct 85394 GATACCATTCCGGCGATCGATTTCTTAGAAGAATATTATAACGCCAATTCAGACAAAGAA 85453 Query 143984 TATGTCGTTGCTGGCTCTGTTGCAGCCACCGAACACGCCGTGATGTGCATGGGCACGAAG 144043 | | || || || || || || || || ||||| | || ||||||||||| |||| Sbjct 85454 T---TGGTGGCAGGTTCAGTCGCTGCAACAGAACATTCTGTAATGTGCATGGGAACGACA 85510 Query 144044 GATGGCGAGTTCGAAACCTTCGAGCGCCTGATCTCTAAAGTCTATCCGGACGGGATTGTC 144103 || || |||| |||||||||| | | | || | |||| ||||| | || ||||| Sbjct 85511 GAAGGTGAGTACGAAACCTTCAAAAGATTAATTACAGAAGTTTATCCAAAAGGAATTGTT 85570 Query 144104 AGTATCGTTTCTGATGCATGGGATTACTGGCAGGTCATTGAC-GACTATCTGCCGCGCCT 144162 ||||||||||||| | ||||||| ||| | || || || || || || || | | Sbjct 85571 TCTATCGTTTCTGATACTTGGGATTTATGGAAAGT-TTTAACAGATTACCTCCCAAGATT 85629 Query 144163 CAAAGATATCATCATGGCGCGTAATGGCAAAGTTGTGATCCGTCCCGACTCTGGTGACCC 144222 ||||| ||| | | | | || ||||| || || ||||| ||| |||||| || Sbjct 85630 AAAAGAAGATATCGTTTCTAGAGAAGGAAAAGTGGTTATTCGTCCTGACAGTGGTGATCC 85689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511757581428720