Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq1888 228 2e-55 seq8001 183 8e-42 seq9614 154 4e-33 seq3889 147 6e-31 seq2342 147 6e-31 seq6976 141 2e-29 seq2613 132 1e-26 seq8080 127 5e-25 seq7676 87.8 5e-13 seq5904 80.6 7e-11 >seq1888 Length=917 Score = 228 bits (252), Expect = 2e-55 Identities = 147/161 (91%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 35794 ATATACGCAGCGAATTGAGCGGCATAACCTAAATCTGAGGCAGCACCTGGCACGGCTGGG 35853 ||| || ||||| |||||||| ||||| || |||||||| || || |||||| ||||||| Sbjct 907 ATACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGACAACATCTGGCAAGGCTGGG 848 Query 35854 ACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTA 35913 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 847 ACGGAAGTTACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTA 788 Query 35914 TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCC 35954 ||||||||||||||||||||| ||||||||||||||||||| Sbjct 787 TCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCC 747 >seq8001 Length=883 Score = 183 bits (202), Expect = 8e-42 Identities = 109/114 (96%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 19685 CTGTTTTACCGCTTCAATTTTAAACTCTTCGGGATAACGCTTACCGCTCATGGGCACCTC 19744 |||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CTGTTTGACTGCTTCAGTTTTAAACTCTTCGGGATAACGCTTACCGCTCATGGGCACCTC 60 Query 19745 TCTTTAAGTCATCTTAAATGACTCTGAGGTGTCTGTTAAACCTGTGGCGATTCA 19798 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 61 TCTTTAAGCCATCTTAAATGACTCTGAGGTGTCTGTTAAACCCGTGGCGATTCA 114 >seq9614 Length=808 Score = 154 bits (170), Expect = 4e-33 Identities = 327/482 (68%), Gaps = 7/482 (1%) Strand=Plus/Minus Query 18855 GCCACTCATAGCTTGTGTACTGACTGCCTTGATCAGAATGAACCAGCACCTGCTTTTGAG 18914 |||| || |||| ||||||| |||||||| || |||||||||| ||||| | | | Sbjct 521 GCCAATCGGAGCTGCTGTACTGGCTGCCTTGGTCGGAATGAACCATCACCTCTTGCTTCG 462 Query 18915 GATTACGTCGCCACACGGCCATCAGAAGTGCATTCAGGACAATATCCTTTGTCATCCGGG 18974 | ||||| | ||| || ||||||| | |||| | | | ||| | |||||| | | Sbjct 461 GTTTACGCCTCCAAACCGCCATCAACAACGCATCAATAGCCAAATCACTGGTCATCTGCG 402 Query 18975 GCTGCATTGACCAGCCAATAACTTTGCGCGAGAACAGGTCAACAACCACAGCCAGATACA 19034 || |||||||||||||| || | || || ||||| || | ||||| |||| ||||| Sbjct 401 ACTTCATTGACCAGCCAACGACCTGCCGAGAAAACAGATCCAGTACCACCGCCAAATACA 342 Query 19035 GCCAGCCTTCGTGAGTCCGGATGTAGGTGATGTCCGTTACCCAACGCTCATCCGGTGCTT 19094 ||||||||| | || || ||||| |||||||| ||||||||| || | ||| | Sbjct 341 ACCAGCCTTCATACGTACGAATGTACGTGATGTCGGTTACCCAAACCTTGTTGGGTTCCA 282 Query 19095 CCGAGTTGAACTGCCGCTGGAGCCTGTTGGGCGTCACGA-TGCTGG-TTTCACCCTTACG 19152 | | |||||| |||| ||| ||||| | |||| ||||| || | || ||| Sbjct 281 CAACATCGAACTGGCGCTTCAGCAAATTGGGTGAGACGACCGCTGGCTTACCGCCGTACT 222 Query 19153 TGCCCGTGGGCTACGGTACCCGACCTGAGCCCTTATCCCGGCACGCTTCATCAG--TCGC 19210 | | | ||| || || || ||||| | | || || | |||||| |||| Sbjct 221 TCCAGGGCGGCGTCGATAACCTGTCTGAGAACGCAGACCTTCAAGACGCATCAGCCTCGC 162 Query 19211 CAGACACGGTTAACTCCGCACTGTTGTCCGGTATCCCGCAGGTCGAGGTGGATCTTGCGA 19270 | ||||| | | || || | | ||| || ||| | ||| ||||| |||||| Sbjct 161 C--ACACGATGACGACCACAATCCTCACCGACCTCGCGC-GATCGTCATGGATTTTGCGA 105 Query 19271 TAACCATAAACGCAACCCGACTCCAGCCAGAACTGCTTTATCAGCCCCGTCAGCCTCAGG 19330 || |||||||||| || |||||||||| | ||||| |||| ||| ||| | | || Sbjct 104 TAGCCATAAACGCCGCCGCTCTCCAGCCAGGAATGCTTGATCAAACCCAGCAGTCGCTGG 45 Query 19331 TC 19332 || Sbjct 44 TC 43 Score = 109 bits (120), Expect = 1e-19 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 18654 AACCATGCCGACGCTTACTGTTATAAAACATTTCGATGTAATCAAAAATATCACCGCGAG 18713 ||||||| || || || ||| || ||||| |||||||||||||| | ||||| |||| Sbjct 657 AACCATGGCGGCGTTTTACGTTGTAGAACATCTCGATGTAATCAAACACATCACTCCGAG 598 Query 18714 CTTCTTCTCGCGTTCCGTAGATCTTTTTCTTTATCCGTTCACGTTTCAGTAGCTGGAAAA 18773 | ||||| ||||| |||||| ||| ||| |||| ||| |||||||| |||||||||| Sbjct 597 CATCTTCCCGCGTGGTGTAGATTTTTCGCTTGATCCTTTCCCGTTTCAGAAGCTGGAAAA 538 Query 18774 AACTTTCTGC 18783 | || || || Sbjct 537 AGCTCTCCGC 528 >seq3889 Length=2902 Score = 147 bits (162), Expect = 6e-31 Identities = 83/84 (99%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 35183 GCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGT 35242 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2780 GCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGT 2839 Query 35243 GGCTTCTGTTTCTATCAGCTGTCC 35266 |||||||||||||||||||||||| Sbjct 2840 GGCTTCTGTTTCTATCAGCTGTCC 2863 >seq2342 Length=4104 Score = 147 bits (162), Expect = 6e-31 Identities = 107/124 (86%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 19581 GTTGAGGAATCCGGGCCATATGCCTTTATCCAGGCATAAAGACTGTGGGTGGTGATACCG 19640 || ||| ||||||| || || |||||||||||||||||| ||||||||||||||| || Sbjct 124 GTGGAGTAATCCGGACCGTACTTCTTTATCCAGGCATAAAGGCTGTGGGTGGTGATATCG 65 Query 19641 AGACGTGTTGCCACGCTGGAAACAGAATGGCCGCGATCAACAACCTGTTTTACCGCTTCA 19700 ||||||||||| ||||||| |||||||| |||||||||| ||||||||| || |||||| Sbjct 64 AGACGTGTTGCAACGCTGGCAACAGAATAACCGCGATCAATAACCTGTTTGACTGCTTCA 5 Query 19701 ATTT 19704 ||| Sbjct 4 GTTT 1 >seq6976 Length=581 Score = 141 bits (156), Expect = 2e-29 Identities = 78/78 (100%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 35877 AATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAAT 35936 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 581 AATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAAT 522 Query 35937 AAGTTGGAGTCATTACCC 35954 |||||||||||||||||| Sbjct 521 AAGTTGGAGTCATTACCC 504 Score = 87.8 bits (96), Expect = 5e-13 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 18567 AATATGAATCGCCACAGATAATCTAGACACTTCCGAGCCGCTGATAATATTGGTTTTC 18624 || |||||||||||| |||||||||||||||||||||||| |||||||| |||||||| Sbjct 58 AAAATGAATCGCCACGGATAATCTAGACACTTCCGAGCCGTTGATAATACTGGTTTTC 1 >seq2613 Length=1234 Score = 132 bits (146), Expect = 1e-26 Identities = 289/428 (68%), Gaps = 6/428 (1%) Strand=Plus/Minus Query 18653 GAACCATGCCGACGCTTACTGTTATAAAACATTTCGATGTAATCAAAAATATCACCGCGA 18712 |||| ||||| || || ||| || ||||| |||||||| | || | || | || Sbjct 1150 GAACTGTGCCGCCGTTTTGGGTTGTAGAACATCTCGATGTACTGGAAGACGTCGGCCCGT 1091 Query 18713 GCTTCTTCTCGCGTTCCGTAGATCTTTTTCTTTATCCGTTCACGTTTCAGTAGCTGGAAA 18772 || || || | | | ||||||| | ||| || || || || |||||||||||||| Sbjct 1090 GCCTCGTCGTGATTGCTGTAGATCCTCCGCTTAATACGCTCCCGCTTCAGTAGCTGGAAG 1031 Query 18773 AAACTTTCTGCGACTGCGTTGTCATGACAGTTACCGCGACGGCTCATACTGCCCTCCAGC 18832 || || || ||||||||||||| ||||| || || || ||||| |||| | | | Sbjct 1030 AAGCTCTCCATCGCTGCGTTGTCATGGCAGTTTCCTCGTCGACTCATGCTGCACACGATG 971 Query 18833 CCGTGTGATTTCAGGAACGACTGCCACTCATAGCTTGTGTACTGACTGCCTTGATCAGAA 18892 |||| |||||| |||||| || | ||| ||| |||| | || || || || Sbjct 970 TCGTGCTCGCGCAGGAAGCTCTGCCAGTCTTCGCTGGTGAACTGGGTTCCCTGGTCGGAG 911 Query 18893 TGAACCAGCA--CCTGCTTTTGAGGATTACGTCGCCACACGGCCATCAGAAGTGCATTCA 18950 |||| ||| | || | || || || || |||||||| || || || || | || Sbjct 910 TGAAGCAGAAGCCCGGGGCTT--GGCTTGCGCCGCCACACTGCGGCCAATAGCGCCTGCA 853 Query 18951 GGACAATATCC-TTTGTCATCCGGGGCTGCATTGACCAGCCAATAACTTTGCGCGAGAAC 19009 || | ||| | ||| || | | ||| ||| |||| || | ||||| ||| Sbjct 852 AAACCAGGTCCGTATGTTGAGTTGGTC-GGGTTGCCCATCCAACGACCTGACGCGAAAAC 794 Query 19010 AGGTCAACAACCACAGCCAGATACAGCCAGCCTTCGTGAGTCCGGATGTAGGTGATGTCC 19069 || |||| || || |||| ||||| |||| |||| || |||||||||||||||||| Sbjct 793 AGATCAAGCACTACCGCCAAGTACAGGAAGCCGTCGTACGTGCGGATGTAGGTGATGTCC 734 Query 19070 GTTACCCA 19077 || ||||| Sbjct 733 GTGACCCA 726 >seq8080 Length=420 Score = 127 bits (140), Expect = 5e-25 Identities = 145/192 (76%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 37511 TGTTAAGAGTGGTTACTTCGCCACACAGCTTAAACCCGCCGTCGAGCGGGTTTTGTCGTT 37570 |||||||||||||||||||| |||||||||||||||||||||||||| |||||| | || Sbjct 229 TGTTAAGAGTGGTTACTTCGTCACACAGCTTAAACCCGCCGTCGAGCTGGTTTTTCCATT 288 Query 37571 TCTTG-GGCTGGGGATTCGTTGGTCCTGGTCTATCCCACATTTATCCATTGACTCGGCTT 37629 | ||| | || | ||| | || | || || || | |||| || |||||| | | Sbjct 289 TTTTGAGTCTCGATATTAGCTGAT--AACTCAATACCTGAGTTATTCACTGACTCCGAGT 346 Query 37630 CTTTGACGTTTCCGCTTCTGATGTGCGGTACGTGGTATTCCCTCAATTGGCACCTCCTGT 37689 || | ||||||| |||| | |||| ||||| |||||||||||||| |||| || | Sbjct 347 CTGTTACGTTTCTGCTT---TTTTGCGATACGTTGTATTCCCTCAATTTACACCCGCTTT 403 Query 37690 ATTGGCGAGGTG 37701 | |||||||| Sbjct 404 GTCTGCGAGGTG 415 >seq7676 Length=607 Score = 87.8 bits (96), Expect = 5e-13 Identities = 48/48 (100%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 23198 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATT 23245 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 49 ATTCGTAATGCGAAGGTCGTAGGTTCGACTCCTATTATCGGCACCATT 96 >seq5904 Length=940 Score = 80.6 bits (88), Expect = 7e-11 Identities = 102/138 (74%), Gaps = 8/138 (6%) Strand=Plus/Plus Query 17924 ATAGCGCCGCTTCAGGATGCGGTTGATTTAGGTATGGCAACAGATGATGAAACGAAACT- 17982 || ||||| ||||||||||| || ||| | | || ||||| || || |||| || Sbjct 18 ATTGCGCCACTTCAGGATGCTGTAGATCTGGAAATCGCAACGGAGGAAGAAAT----CTC 73 Query 17983 GTTACTGGCA---TGGAAAAAATATCGCGTGCTATTGATGCGTGTTAATACTTCAACAGC 18039 ||| |||| | ||||| || ||||| ||| | ||| ||||||||||| |||| || Sbjct 74 GTTGCTGGAAGCCTGGAAGAAGTATCGGGTGTTGCTGAACCGTGTTAATACAACAACTGC 133 Query 18040 ACTCGATATTGAATGGCC 18057 || |||||||||||||| Sbjct 134 ACCGGATATTGAATGGCC 151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127083801744480