Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_022920.1 Length=139738 Score E Sequences producing significant alignments: (Bits) Value seq232 190 2e-43 >seq232 Length=384298 Score = 190 bits (210), Expect = 2e-43 Identities = 427/637 (67%), Gaps = 21/637 (3%) Strand=Plus/Plus Query 133738 CAGCAGGTCATGCAATTAGTTTTAAAGGCAGTGATACAGTACCTGTAGTGGATTTCTTAG 133797 |||| || ||| | | ||||||| ||| |||||| | || | | |||||||||| Sbjct 85362 CAGCTGGACATTTATTGAGTTTTACAGGATCTGATACCATTCCGGCGATCGATTTCTTAG 85421 Query 133798 AATCATATTACAATGCAGACGTAGAGAAGGAAATGGTTGTTGCTTCTATCCCTGCTACTG 133857 || |||||| || || | ||| || ||| |||| | | ||| || |||| || | Sbjct 85422 AAGAATATTATAACGCCAATTCAGACAAAGAATTGGTGGCAGGTTCAGTCGCTGCAACAG 85481 Query 133858 AGCACTCAGTAATGTGCGCAAATGGTAATTATGAAACCATGGATGAGTATGAAACATATA 133917 | || || ||||||||| |||| || | || | |||||| ||||| | | Sbjct 85482 AACATTCTGTAATGTGC----ATGGGAACGACAGAA-----GGTGAGTACGAAACCTTCA 85532 Query 133918 AACGTATGTTAACAGAAATATATCCAACAGGCATTTTCTCTATTGTATCTGATACTTGGG 133977 || | | | |||||| | ||||||| ||| ||| | ||||| || ||||||||||||| Sbjct 85533 AAAGATTAATTACAGAAGTTTATCCAAAAGGAATTGTTTCTATCGTTTCTGATACTTGGG 85592 Query 133978 ACTTTTGGGGTAATATGACTAAAACTTTACCT----AGATTAAAGGATATTATTATGGAA 134033 | || ||| | | | ||| | |||||| |||||||| || ||| | Sbjct 85593 ATTTATGGAA-AGTTT---TAACAGATTACCTCCCAAGATTAAAAGAAGATATCGTTTCT 85648 Query 134034 CGTGATGGTAAAGTAGTAATCAGACCTGATAGTGGAGACCCTGTTAAAATTATTTGCGGA 134093 | || || ||||| || || | ||||| ||||| || || || |||||| |||||| Sbjct 85649 AGAGAAGGAAAAGTGGTTATTCGTCCTGACAGTGGTGATCCAATTTTAATTATCTGCGGA 85708 Query 134094 GACCCTGATGCAGATACTGAATATGAACGTAAAGGTGCAGTAGAAGTACTTTGGGATACA 134153 | ||||| | | | || ||| | || ||||| | | ||| | ||||||||| Sbjct 85709 AATCCTGACGGAAAAACAGAACAAGAGAAAAAAGGAGTTATCGAATTGCTTTGGGATGTT 85768 Query 134154 TTTGGAGGTACTGAAACTGAAAAAGGGTACAAAGTATTAGATGAACACGTAGGATTAATT 134213 ||||| || || || || ||||| | ||||| ||| | | ||| | ||| |||| Sbjct 85769 TTTGGTGGAACGACAAACGATAAAGGTTTCAAAGAATTGGTTCCACAAATCGGAGCAATT 85828 Query 134214 TATGGAGACTCTATTAACTATGAACGTGCTCAAC--AAATTTGTGAAGGATTAAAAGAAA 134271 ||||| || ||||| | | | | || ||| |||| || || ||||||||| | Sbjct 85829 TATGGCGATAGTATTACCGTAGCAAGAGC--AACTGAAATCTGCGAGAGATTAAAAGCGA 85886 Query 134272 AAGGTTTTGCAAGTATTAATGTTGTATTAGGTGTAGGTAGTTTCTCTTACCAATTTAATA 134331 |||||||||| || || || || ||||| | || |||| | || |||| |||| Sbjct 85887 AAGGTTTTGCTTCTACAAACGTGGTTTTAGGAATTGGATCTTTCACGTATCAATACAATA 85946 Query 134332 CTCGTGATACTCACGGGTTTGCAATCAAAGCAACGTA 134368 | ||||||||| || |||||||| |||||||| || Sbjct 85947 CACGTGATACTTTTGGTTTTGCAATGAAAGCAACTTA 85983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446958822454560