Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_023498.1 Length=62466 Score E Sequences producing significant alignments: (Bits) Value seq10595 156 2e-33 >seq10595 Length=412 Score = 156 bits (172), Expect = 2e-33 Identities = 296/427 (69%), Gaps = 34/427 (8%) Strand=Plus/Minus Query 56214 TCGATCACCTTGACCGGGTGTGGCTGTTCCTGCACTCCGGTTCGCGTGGCGTCGGCAACA 56273 ||||| | || || ||||| ||||||||||||||||| || ||||| ||||||||||||| Sbjct 404 TCGATGAGCTCGATCGGGTCTGGCTGTTCCTGCACTCGGGCTCGCGAGGCGTCGGCAACA 345 Query 56274 AGATCGCCCAGCGGCATATCTCTGCGGCGCAGGGGTATTGCCAGGCGCAAGGGCTGCA-- 56331 |||||||| || || ||| | | || ||| || | || |||| || | || | Sbjct 344 AGATCGCCGGGCACCACATCGCCGTCGCCCAGCGG-CTGGCGAGGC---AGTGGTGGATC 289 Query 56332 ---CGTCCCGCACCGCGACCTCGCGTACCTCGTCGAGGGCACTGTCGAGTTCGACCGCTA 56388 | ||||| ||| |||||| || ||||| ||||||||||| |||||| |||||| Sbjct 288 GACCTTCCCG-ACCCCGACCTGGCATACCTGGTCGAGGGCACACCGGAGTTCACCCGCTA 230 Query 56389 CCTCGTCGAGCTGCGGTGGGCGCAGCGGTTCGCG-TACTACAACCGCGCCGAGATGATGG 56447 | || |||||||||||||| |||| |||||| | || ||||| | |||||||||| Sbjct 229 CATCCGGGAGCTGCGGTGGGCCCAGCACTTCGCGCTGCT-GAACCGGGAGGAGATGATGG 171 Query 56448 ACCGTTTCGCG-CAGGCGTTCCGGCATTGGATCGG----CGCCGACGCCCCGATCGACGA 56502 | ||||| || ||||||| | |||| | || ||||| ||||||| Sbjct 170 A-----TCGCGTCA-----TCCGGCA-GGTGTCGGAGTTCCTCGGAACCCCGGTCGACGA 122 Query 56503 GCTGGTCGTCGAGACGATCAACACGCATCACAACTACACGCAGAAGGAGCTGCACGGCGG 56562 | | ||| |||||| || ||||||| ||| || |||| |||| ||| Sbjct 121 ACAG------GAGCGCATCAACTGCCACCACAACTTCACCGAGTCGGAGAAGCACTACGG 68 Query 56563 CCGTGAGGTGTGGTTGACCCGCAAGGGTGCGATCGACGCGCACGAGGGTGTGCGGGGCCT 56622 |||||||| || | || ||||| || ||| | ||| ||| ||| | |||||| Sbjct 67 GAAGCAGGTGTGGGTGTCACGGAAGGGAGCCATCCAGGCGGACGCCGGTCGACCGGGCCT 8 Query 56623 GATTCCC 56629 || ||| Sbjct 7 CATCCCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199733819473554