Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_023501.1 Length=159590 Score E Sequences producing significant alignments: (Bits) Value seq232 105 7e-18 >seq232 Length=384298 Score = 105 bits (116), Expect = 7e-18 Identities = 145/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 6386 CTGACAGCATTCCAGCTATCGTGTATTTAGAAGAATACTATAATGCTAATGTTGAAACAG 6445 |||| | |||||| || |||| | ||||||||||| ||||| || ||| || | || Sbjct 85392 CTGATACCATTCCGGCGATCGATTTCTTAGAAGAATATTATAACGCCAATTCAGACAAAG 85451 Query 6446 AATTAGTAGCAGGTTCTGTAAGCGCTACTGAACATAGTGTTATGTGCGCATCAGCAGGTG 6505 |||| || |||||||| || || || |||||| ||| |||| |||| | | | Sbjct 85452 AATTGGTGGCAGGTTCAGTCGCTGCAACAGAACATTCTGTAATGT--GCATGGGAACG-A 85508 Query 6506 AAGACTTAGATGAGTACGAGACATTTAAACGATTAATTACAGAAGTGTACCCTACGGGTA 6565 ||| || ||||||||| || || ||| |||||||||||||||| || || | || | Sbjct 85509 CAGA---AGGTGAGTACGAAACCTTCAAAAGATTAATTACAGAAGTTTATCCAAAAGGAA 85565 Query 6566 TTGTAAGTATCGTATCTGAT 6585 |||| |||||| |||||| Sbjct 85566 TTGTTTCTATCGTTTCTGAT 85585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510474596076000