Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_023573.1 Length=142094 Score E Sequences producing significant alignments: (Bits) Value seq232 190 2e-43 >seq232 Length=384298 Score = 190 bits (210), Expect = 2e-43 Identities = 427/637 (67%), Gaps = 21/637 (3%) Strand=Plus/Plus Query 130754 CAGCAGGTCATGCAATTAGTTTTAAAGGCAGTGATACAGTACCTGTAGTGGATTTCTTAG 130813 |||| || ||| | | ||||||| ||| |||||| | || | | |||||||||| Sbjct 85362 CAGCTGGACATTTATTGAGTTTTACAGGATCTGATACCATTCCGGCGATCGATTTCTTAG 85421 Query 130814 AATCATATTACAATGCAGACGTAGAGAAGGAAATGGTTGTTGCTTCTATCCCTGCTACTG 130873 || |||||| || || | ||| || ||| |||| | | ||| || |||| || | Sbjct 85422 AAGAATATTATAACGCCAATTCAGACAAAGAATTGGTGGCAGGTTCAGTCGCTGCAACAG 85481 Query 130874 AGCACTCAGTAATGTGCGCAAATGGTAATTATGAAACCATGGATGAGTATGAAACATATA 130933 | || || ||||||||| |||| || | || | |||||| ||||| | | Sbjct 85482 AACATTCTGTAATGTGC----ATGGGAACGACAGAA-----GGTGAGTACGAAACCTTCA 85532 Query 130934 AACGTATGTTAACAGAAATATATCCAACAGGAATTTTCTCTATTGTATCTGATACTTGGG 130993 || | | | |||||| | ||||||| ||||||| | ||||| || ||||||||||||| Sbjct 85533 AAAGATTAATTACAGAAGTTTATCCAAAAGGAATTGTTTCTATCGTTTCTGATACTTGGG 85592 Query 130994 ACTTTTGGGGTAATATGACTAAAACTTTACCT----AGATTAAAGGATATTATTATGGAA 131049 | || ||| | | | ||| | |||||| |||||||| || ||| | Sbjct 85593 ATTTATGGAA-AGTTT---TAACAGATTACCTCCCAAGATTAAAAGAAGATATCGTTTCT 85648 Query 131050 CGTGATGGTAAAGTAGTAATCAGACCTGATAGTGGAGACCCTGTTAAAATTATTTGCGGA 131109 | || || ||||| || || | ||||| ||||| || || || |||||| |||||| Sbjct 85649 AGAGAAGGAAAAGTGGTTATTCGTCCTGACAGTGGTGATCCAATTTTAATTATCTGCGGA 85708 Query 131110 GACCCTGATGCAGATACTGAATATGAACGTAAAGGTGCAGTAGAAGTACTTTGGGATACC 131169 | ||||| | | | || ||| | || ||||| | | ||| | ||||||||| Sbjct 85709 AATCCTGACGGAAAAACAGAACAAGAGAAAAAAGGAGTTATCGAATTGCTTTGGGATGTT 85768 Query 131170 TTTGGAGGTACTGAAACTGAAAAAGGGTACAAAGTATTAGATGAACATGTAGGATTAATT 131229 ||||| || || || || ||||| | ||||| ||| | | ||| | ||| |||| Sbjct 85769 TTTGGTGGAACGACAAACGATAAAGGTTTCAAAGAATTGGTTCCACAAATCGGAGCAATT 85828 Query 131230 TACGGAGACTCTATTAACTATGAACGTGCTCAAC--AAATTTGTGAAGGATTAAAAGAAA 131287 || || || ||||| | | | | || ||| |||| || || ||||||||| | Sbjct 85829 TATGGCGATAGTATTACCGTAGCAAGAGC--AACTGAAATCTGCGAGAGATTAAAAGCGA 85886 Query 131288 AAGGTTTTGCAAGTATTAATGTTGTATTAGGTGTAGGTAGTTTCTCTTACCAATTTAATA 131347 |||||||||| || || || || ||||| | || |||| | || |||| |||| Sbjct 85887 AAGGTTTTGCTTCTACAAACGTGGTTTTAGGAATTGGATCTTTCACGTATCAATACAATA 85946 Query 131348 CTCGTGATACTCACGGGTTTGCAATCAAAGCAACGTA 131384 | ||||||||| || |||||||| |||||||| || Sbjct 85947 CACGTGATACTTTTGGTTTTGCAATGAAAGCAACTTA 85983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454496761334880