Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_023724.1 Length=62991 Score E Sequences producing significant alignments: (Bits) Value seq10595 104 9e-18 seq4225 102 3e-17 >seq10595 Length=412 Score = 104 bits (114), Expect = 9e-18 Identities = 175/246 (71%), Gaps = 13/246 (5%) Strand=Plus/Minus Query 52410 GTGTGGCTGTTCCTGCACTCCGGTTCACGTGGCGTCGGCAACAAGATCGCCCAGAAGCAC 52469 || ||||||||||||||||| || || || ||||||||||||||||||||| | | ||| Sbjct 387 GTCTGGCTGTTCCTGCACTCGGGCTCGCGAGGCGTCGGCAACAAGATCGCCGGGCACCAC 328 Query 52470 ATCAAGATCGCGCAAGCCGAATGCGA-CCTGTACGGCATCGAACTGCCCGGCGGCAACAA 52528 ||| |||| | ||| | |||| | || | ||||| || |||| || Sbjct 327 ATCGCCGTCGC-CCAGCGGCTGGCGAGGCAGTGGTGGATCGACCTTCCCG------ACCC 275 Query 52529 GGATCTGGCGTACCTCGTCGAAGGTGAACCGTCGTTTGACGCG-TACCTGAATGAGCTGC 52587 || ||||| ||||| ||||| || |||| | || || || ||| | ||||||| Sbjct 274 CGACCTGGCATACCTGGTCGAGGGCACACCGGAG-TTCACCCGCTACATCCGGGAGCTGC 216 Query 52588 GTTGGGCGCAACAGTTCGCACTGTTCAACCGCGACGAAATGATGGACCG-GT--ACCGGC 52644 | ||||| || || ||||| ||| | ||||| || || |||||||| || || ||||| Sbjct 215 GGTGGGCCCAGCACTTCGCGCTGCTGAACCGGGAGGAGATGATGGATCGCGTCATCCGGC 156 Query 52645 AGGCGT 52650 ||| || Sbjct 155 AGGTGT 150 >seq4225 Length=585 Score = 102 bits (112), Expect = 3e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 52000 TGCCGTTCGTGCATCCGCACGTTGCCCTCATGCCCGACGCGCACGTCGGCAAAGGTTCGT 52059 |||||||||| ||| || || | ||||| |||| |||||| |||||||| | Sbjct 229 TGCCGTTCGTCGGCCCGTGGGTGGCGGTGATGCCGGACGTGCACGTAGGCAAAGGGGCCA 170 Query 52060 CTGTTGGTACCGTCATCCCCACCCGCGGCGCAGTCATCCCCGCCGCGGTCGGTGTCGACA 52119 | || || | || ||||| ||||||||||| |||| || ||||||||||| || |||| Sbjct 169 CCGTGGGCTCGGTGATCCCTACCCGCGGCGCGATCATTCCGGCCGCGGTCGGCGTGGACA 110 Query 52120 TCGGCTGCGGCATG 52133 |||||||||||||| Sbjct 109 TCGGCTGCGGCATG 96 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201413545477104