Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_023744.1 Length=60588 Score E Sequences producing significant alignments: (Bits) Value seq10595 147 8e-31 seq4225 105 3e-18 >seq10595 Length=412 Score = 147 bits (162), Expect = 8e-31 Identities = 167/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 49813 CGGGTGTGGCTGTTCCTGCACTCCGGGTCGCGTGGCGTCGGCAACAAGATCGCCCAAAAG 49872 ||||| ||||||||||||||||| || ||||| ||||||||||||||||||||| | Sbjct 390 CGGGTCTGGCTGTTCCTGCACTCGGGCTCGCGAGGCGTCGGCAACAAGATCGCCGGGCAC 331 Query 49873 CACATCAAGGTCGCGCAGAAACTCATGGACCGCTGGTGGATTCAGCTCCCAAGCCCCGAC 49932 |||||| ||||| ||| || | | |||||||| | || || ||||||| Sbjct 330 CACATCGCCGTCGCCCAGCGGCTGGCGAGGCAGTGGTGGATCGACCTTCCCGACCCCGAC 271 Query 49933 CTGGCGTACTTGCCGCAAGGCACACCGGAGTTCGCCGACTATCTGCGGGAGCTGCACTGG 49992 ||||| ||| || | ||||||||||||||| || ||| | |||||||||| ||| Sbjct 270 CTGGCATACCTGGTCGAGGGCACACCGGAGTTCACCCGCTACATCCGGGAGCTGCGGTGG 211 Query 49993 GCGCAGCGGTTCGCGCTAGAGAACCGCGCCGAAATGATGGACCG 50036 || |||| |||||||| |||||| | || |||||||| || Sbjct 210 GCCCAGCACTTCGCGCTGCTGAACCGGGAGGAGATGATGGATCG 167 >seq4225 Length=585 Score = 105 bits (116), Expect = 3e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 49383 CGCCGGCCTGCCGTTCGTCCACCCGCATGTGGCGCTGATGCCCGACGCGCACGCCGGCAA 49442 ||||| ||||||||||| |||| |||||| ||||||| |||| ||||| ||||| Sbjct 237 CGCCGCGGTGCCGTTCGTCGGCCCGTGGGTGGCGGTGATGCCGGACGTGCACGTAGGCAA 178 Query 49443 GGGTTCATCGGTCGGCACCGTCATCCCGACTATCGACGCCGTGATCCCGGCCGCGGTGGG 49502 || | | || ||| | || ||||| || || ||| | || ||||||||||| || Sbjct 177 AGGGGCCACCGTGGGCTCGGTGATCCCTACCCGCGGCGCGATCATTCCGGCCGCGGTCGG 118 Query 49503 CGTGGACATCGGCTGCGGGATGATCGCCGCCCGCACCA 49540 |||||||||||||||||| ||| || | ||||||| Sbjct 117 CGTGGACATCGGCTGCGGCATGGCGGCGGTGCGCACCA 80 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193729209356200