Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_024359.1 Length=133048 Score E Sequences producing significant alignments: (Bits) Value seq3818 118 9e-22 >seq3818 Length=586 Score = 118 bits (130), Expect = 9e-22 Identities = 325/493 (66%), Gaps = 4/493 (1%) Strand=Plus/Plus Query 92489 CAATCATCTATCTTAGAGGGTATTAATTTCTACAGCGGTTTTGCTTACTTCTATAACCTT 92548 || || || ||| | || || || || ||||| ||| || || | ||||| ||||| Sbjct 94 CAGTCGTCGATCCTGGAAGGCATCAACTTCTATTCCGGCTTCGCGTTTTTCTACAACCTG 153 Query 92549 GTTCGTCAAAACAAGATGACGGGAACAGGTAAAATCATTAGCTTCATTAATCGTGATGAG 92608 || || || ||| ||||| || || || || ||||| |||||||| || || || || Sbjct 154 GTCCGCCAGAACCGCATGACCGGCACCGGCAAGATCATCAGCTTCATCAACCGCGACGAA 213 Query 92609 TTAGCCCATTCGAAGTTTATTTCTGAGCTAATTAGAGCTATTGTAGGGGAAAACCCTGAA 92668 | ||||| | ||||| || || || || | || || | || || |||| | Sbjct 214 CTGGCCCACACCAAGTTCATCAGCGAACTGATCCGCGCCATCATCGGCGAGAACCAGCAG 273 Query 92669 CTACAAACAGATGAACTAAATGACTACGTGTATGCTTCTTTTAGACATGCCGTAGAGCTA 92728 || || || | || | | |||||| | | | | || |||||| | | ||| Sbjct 274 CTTCAGGGCGACCAGCTCACCGCTTACGTGCACGATGCATTCGAGCATGCCATCGCGCTG 333 Query 92729 GAACAAGCG-TGGTCTAGTGAGGTACTACAGGGCATTGAAGGAATTGATGTGGAAGAAAT 92787 ||| | ||| ||| | | ||||| || | ||||| || || || || ||||| || || Sbjct 334 GAA-ACGCGCTGGACCGGCGAGGTGCTGGACGGCATCGACGGCATCGACGTGGACGAGAT 392 Query 92788 GTTAGACTATGTAAAATATCGTGCTAATAAAATGTTAGGGATGCTAGGTCTCCAACCAAT 92847 | | ||| || || || || || || || ||| || ||||| || || | | Sbjct 393 GATCCGCTACGTGAAGTACCGCGCCAACAAGATGGCCGGCATGCTCGGCATCGAGAAGCT 452 Query 92848 GTATCAAGGTCATACA-GAAAATTCTATGACATGGATTAAAGCTTACGCCGATAATTTTA 92906 ||| || | || | | || ||| | ||||| || || || ||||| ||||| | Sbjct 453 GTA-CAGCGACACCAACGTCAACGTGATGCCGTGGATCAAGGCCTATGCCGACAATTTCA 511 Query 92907 CAGAAACAAAAACCGACTTTTTCGAAATGCGTAACTCTAGTTACAAGAAAACAAACTTAG 92966 | || || || |||||||| ||||| ||||| ||| | ||||||||||| || || | | Sbjct 512 CCGAGACCAAGACCGACTTCTTCGAGATGCGCAACGCCAGTTACAAGAAGACCAATTCGG 571 Query 92967 ACAATGGGTTCGA 92979 |||| || ||||| Sbjct 572 ACAACGGCTTCGA 584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425559382868918