Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_024366.1 Length=62661 Score E Sequences producing significant alignments: (Bits) Value seq10595 113 2e-20 >seq10595 Length=412 Score = 113 bits (124), Expect = 2e-20 Identities = 292/439 (67%), Gaps = 41/439 (9%) Strand=Plus/Minus Query 53871 GTCGACCAGCACGGCCGGCTGTGGCTGTTCCTGCATTCCGGTTCACGCGGTGTCGGCAAC 53930 ||||| ||| || ||| | |||||||||||||| || || || || || ||||||||| Sbjct 405 GTCGATGAGCTCGATCGGGTCTGGCTGTTCCTGCACTCGGGCTCGCGAGGCGTCGGCAAC 346 Query 53931 AAGATCGCCCAGAAGCACATCAAGATCGCGCAAGCCGAATGCGCCG-AGCATGGTG--TC 53987 ||||||||| | | |||||| |||| | ||| | ||| | || ||||| || Sbjct 345 AAGATCGCCGGGCACCACATCGCCGTCGC-CCAGCGGCTGGCGAGGCAG--TGGTGGATC 289 Query 53988 GAACTGCCCGGCGGCAACAAGGATCTAGCCTACCTCGTCGAGGGCGAACCGTCGTTCGGC 54047 || || |||| || || || || ||||| ||||||||| |||| |||| | Sbjct 288 GACCTTCCCG------ACCCCGACCTGGCATACCTGGTCGAGGGCACACCGGAGTTCACC 235 Query 54048 GCGTACCTCGCTGAGCTGCGTTGGGCGCAACAGTTCGCGATGTTCAACCGCAACGAGATG 54107 ||| || |||||||| ||||| || || |||||| || | ||||| | |||||| Sbjct 234 CGCTACATCCGGGAGCTGCGGTGGGCCCAGCACTTCGCGCTGCTGAACCGGGAGGAGATG 175 Query 54108 ATGGACCG-GT--ACCGGCAAGCGTTCGCGCACTGGCTCGACATCGGTGTCGACGAGGCG 54164 ||||| || || |||||| | || || | | |||| | | |||||||| Sbjct 174 ATGGATCGCGTCATCCGGCAGGTGT---CGGAGTTCCTCGGAACCCCGGTCGACGA---- 122 Query 54165 CCAGTCGTCGAGATCGCCGGCGAACGCGTCAACGCGCACCACAACTACACCACCCAGGAG 54224 ||| || ||| ||||| |||||||||| |||| |||| Sbjct 121 ACAG-----------------GAGCGCATCAACTGCCACCACAACTTCACCGAGTCGGAG 79 Query 54225 CACATCAACGGTGAGCTGGTGTGGGTGACCCGCAAGGGCGCCATCAGCGCGCAACTCGGT 54284 | | |||| ||| |||||||||| | || ||||| |||||| ||| | |||| Sbjct 78 AAGCACTACGGGAAGCAGGTGTGGGTGTCACGGAAGGGAGCCATCCAGGCGGACGCCGGT 19 Query 54285 -GAGCGTGGCCTCATcccc 54302 || || |||||||||||| Sbjct 18 CGACCG-GGCCTCATCCCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200357717703444