Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq32 168 6e-37 seq444 98.7 1e-15 seq1158 96.9 3e-15 >seq32 Length=13759 Score = 168 bits (186), Expect = 6e-37 Identities = 1195/1888 (63%), Gaps = 86/1888 (5%) Strand=Plus/Plus Query 147938 GGCAGCGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTA 147997 |||||||| |||| | || |||||||||||| ||||| || ||| | ||||||||| Sbjct 2773 GGCAGCGGCACGAGTTCTCAAATAGTACATGCCAGTCTTAAGACCCTTCTTCCATGCGTA 2832 Query 147998 GTCGTGCACCGACGACATGAGCGTGT--ACGTCGGGTGCGGCAC-AAACAGATTAAACGA 148054 | ||||| || | ||||| || | || ||| ||||| ||| | || || || Sbjct 2833 GAAGTGCATTGAGG---TGAGCTTGGCAAAGTTGGGCTCGGCAATAAAGACGTTGAATGA 2889 Query 148055 CTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCG-CTTTATCT 148113 ||| || || ||||| || ||||| || || ||||| |||||||| | | || | Sbjct 2890 CTGTGATTGATCGATGAAGGCACCACGATCGGCAGCCATGTCAATGAGACTACGTTGACG 2949 Query 148114 TCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCT 148173 ||||||||| | |||||||||| | ||| | | ||||| ||||| | | || Sbjct 2950 G-ATCTCCCAGACAGTCTTGTACAACTCCTTCAAGTCCTCGGGGATGCCTGGTACGTTCT 3008 Query 148174 GCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCT 148233 | | || || |||| || | || || || ||| || || | | | || Sbjct 3009 GGATGGAACCACGGTTGGCGATGATGTGGTTCTTCATCTCTGGGGTCCACAAGCCAAGGG 3068 Query 148234 CGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCC 148293 | || || || | | || | || || || || ||||| || || | ||| || | Sbjct 3069 CCATGAGATCGGCAAGCAACTGCTTGTTGACGACGGTGAACTCTCCAGCCAACACACGAC 3128 Query 148294 GCAGA-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCG 148352 | ||| || | |||| || | || || || ||||||||||||| | ||||||| | Sbjct 3129 G-AGAGTAGATGTTGGAGGTGTATGGCTCGAAGCACTCGTTGTTGCCGAGGATCTGCGAG 3187 Query 148353 GTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATT 148412 || | || ||||||||| || | |||| |||||||| | |||| || || Sbjct 3188 GTTGAGGCAGTGGGCATGGGGGCAATGAGCAAGGAGTTGCGGAGACCGTTCTTGACGATG 3247 Query 148413 TTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGT--GTCAC-GTTCCACATGTCG 148469 ||| ||| ||| | | ||||||||| | || || || | ||| | |||||||||| Sbjct 3248 TTGGCCTTGAGACCAGTCCAGTCCCAACGAGGGGAGGGGACGACACCGGGCCACATGTCG 3307 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCTGC-CCTCGTACGAGCTG-TACGGTCCGTGCG 148527 || || || || || | ||||| || || | | | || || | || ||| Sbjct 3308 TATTGGAGGATACCCTTGGAGGCGGG--TGATCCAGGGAAGCTCTCATAGGAACCTTGCT 3365 Query 148528 CCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCC 148587 | | |||| ||| | || ||| ||| | |||| || ||||| ||||| | | Sbjct 3366 CGACAGCCATCTCGTTGGACGAGGTGAGGGCGGCAAAGTATATGGTCTCAGCAATCTCCT 3425 Query 148588 TGTTGAG-----CAGCGCC-GCCGACTCGCTTTCGTACGGCATACGCA-GCCGCACAAAC 148640 ||||||| ||||||| || || ||| | |||| ||||| | || | || Sbjct 3426 TGTTGAGGACTGCAGCGCCAGCAGAGTCGA------AGGGCAAACGCAAGGCG-ATGAAG 3478 Query 148641 GCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGC 148700 | || || || || || | || | || ||||| ||||| ||||||||| | || Sbjct 3479 ACATCAGCGAGACCTTGGATTCCAATACCGATGGGACGGTGACGCATGTTGGAGCGACGA 3538 Query 148701 GCGCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGC------ACC 148754 || ||||| || |||| |||||||||||||||||||| || || | ||| Sbjct 3539 GCCTCCTCGACGGGGTAGTAGTTGCGGTCGATGATCTTGTTGAGGTTTCTGGTGATGACC 3598 Query 148755 ---ACCACCTTT-----GTAATTCTG--CGCAGCAAT-----TCAAAATCGTACTTGTCA 148799 ||||| | || | || || || | ||| | |||| | Sbjct 3599 TTGACCACATCGAACAAGTGTTGGTGGTCGAAGTAGGCGGGCTCACCTGGTTGCTTGCCC 3658 Query 148800 TCTACGA--TGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCG 148857 || || | | | || || |||||| ||||| | ||||| || || ||| || | Sbjct 3659 TCCTTGACATACTTGGG--CAGGGCGATCGAGGCCAAGTTGCAAACAGCAACCTCCTCTG 3716 Query 148858 GGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCT 148917 | | |||| | | |||||| | ||||| ||| |||| ||| ||| | ||| | Sbjct 3717 GTGAAGTGTATTGGATGATCTCAGTGCACAAGTTGGAGCATGAGATGGTGCCGAGGTTTT 3776 Query 148918 TTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCA 148977 ||| ||| |||| ||||| || |||||||||| ||||| || ||||| || | Sbjct 3777 GTTGGTTGGACTTGGCATTGCATGCATCCTTGTACAAGATGTAGGGAGTACCAGTCTCGA 3836 Query 148978 CCTGCGTTTCCACTATG---AACCGATGCAGGTCCTGCGC---GCGCACTTGCTGCTCGT 149031 ||| | || | ||| |||| | || || || || | ||| | ||| | Sbjct 3837 TCTGGGACTCGATGATGGCGAACCAA---AGATCTTGAGCCTTGACCACCT--TGCGGGG 3891 Query 149032 AGCGACCCTCC-TG--CTCGTA--TAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCA 149086 | |||| || |||||| | ||||| | || || | |||| | | |||||| Sbjct 3892 AA-GACCTGGGGTGGCCTCGTACTTCAAGTACA-AGTCGTT-GAACTCTTGGCCGTACTT 3948 Query 149087 ATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACA- 149145 || ||||||| | || || ||||| | | | |||| | | | ||| || Sbjct 3949 GTCAGCGAGACCCTTGGCCTCGTTGGGGCAGAACAATGCCCACTCCTCATT-GCGCTCAA 4007 Query 149146 CGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAG- 149204 | |||| ||| || ||||| || | |||||| || || | | ||| || || ||| Sbjct 4008 CACGCTCCATGAAGAGATCTGGAATCCAGAGGGCATAGAACAAGTCACGAGCAC-GCATC 4066 Query 149205 TCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGC 149264 || || ||| ||| ||| |||| ||| | || | ||| |||||||| ||| Sbjct 4067 TCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAGACGTCGGCGTGCCATGGC 4126 Query 149265 TCAATGTACACCGCGAGCGCGCCCTTGCGCTT---GCCGCCCTGGTCGACGTGGCGCACC 149321 || | ||| || || | || ||||||||||| ||| || |||||||| | ||| | Sbjct 4127 TCGAGGTAGACTGCAAATGCACCCTTGCGCTTTCCGCCACCTTGGTCGACATAGCGGGCA 4186 Query 149322 ATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTA 149381 ||| ||| ||||| || | ||| || | | || ||| |||||||| || || Sbjct 4187 GTGTCGTTGAACACACGGAGCATGGGGACTAGACCGTTGGAGGTGCCGTTGGTGCCGCGG 4246 Query 149382 ATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTT 149441 ||| || | || || | |||||||| | ||| ||||| || | |||| Sbjct 4247 ATGTAGGAGCGGGCAGCACGGATCTTGTGCACAGCAATGCCAATGCCTCCAGCAGACTTG 4306 Query 149442 GAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATG 149501 |||||| || || | ||| || |||||| ||||||||| |||| |||||| Sbjct 4307 GAGATGAGAGCACATTGCTTGAGTGTGTCGTAGATACCCTCGATGGAGTCGTCCTTCATT 4366 Query 149502 GTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGG 149561 | || ||||| ||| |||| || ||| | | ||||| || ||||| |||||| Sbjct 4367 TGGACGAGGAAGCAGGAGGACATCTGGGGATAGGGGGTGCCAGCATTGAACAGGGTGGGA 4426 Query 149562 CTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGA--GCACGCGGTCCA 149619 |||| || || || ||| |||| || | | ||| | ||| ||| || || | Sbjct 4427 GTGGCATGAGTGAAGTATCTCTGTGACAAGAGGTGGTAGGTGCCGATGGCA-GC-CTCAA 4484 Query 149620 TGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCA 149679 |||| ||||| ||||| || | || || ||||||| | || || || ||||| | Sbjct 4485 TGTCGTCGCCGTGGATACCAAGGGACACACGCATCAAGAGGTGTTGGGGACGCTCGATGA 4544 Query 149680 CTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGT 149739 | | || | |||||||| || | ||||||| |||||||| | | || Sbjct 4545 TCTCGCCGTTGATGCGGTGCAAGTAGGAACGCTCCAATGTCTTGAAGCCAAAGAAGTCGT 4604 Query 149740 AGTCAAAGTCGCGGCCGTGGTCAATGGC 149767 | |||||||||||| || | | ||||| Sbjct 4605 ACTCAAAGTCGCGGGAGTAGACGATGGC 4632 >seq444 Length=38654 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| || || || ||||| || | || ||| | |||||||||||||| || Sbjct 5241 GTGGACTCCTTTTGGATGTTGTAGTCAGAAAGAGTACGACCA-TCCTCGAGCTGCTTACC 5183 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || ||||| ||||||||||| |||||| ||| Sbjct 5182 AGCGAAGATGAGACGTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGTCTT 5123 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||||| ||||| | ||| || || | |||| ||| || || || || || Sbjct 5122 GACATTCTCAATGGTGTCAGAACCCTCGACCTCAAGAGTGATGGTCTTACCAGTGAGGGT 5063 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 5062 CTTAACGAAGATTTGCAT 5045 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/208 (71%), Gaps = 3/208 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| || || || ||||||||| | || ||| | ||||| || |||||||| Sbjct 5013 GTGGACTCCTTTTGGATGTTGTAATCGGAGAGAGTACGACCA-TCCTCAAGTTGCTTGCC 4955 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| || || ||||| || || || || |||||||| |||||| ||| Sbjct 4954 GGCAAAGATGAGACGTTGTTGGTCAGGTGGAATTCCCTCCTTGTCTTGGATCTTGGTCTT 4895 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||| | || |||| ||| || || | ||| | || ||||| |||||||| Sbjct 4894 GACGTTCTCGATAGTATCGGAACCCTCGACCTCCAAGGTAATAGTCTTGCCTGTCAGAGT 4835 Query 133643 TTTTACGAAAATCTGCATGGCTTATTTA 133670 ||| || || || ||||| | || |||| Sbjct 4834 TTTAACAAAGATTTGCATTG-TTGTTTA 4808 >seq1158 Length=25781 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||||||| | ||| ||| | |||||||| Sbjct 9274 AAGTGAAGGGTTGACTCCTTTTGAATGTTGTAATCGGAGAGAGTGCGACCA-TCCTCGAG 9332 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||||| ||| | ||||| || || || ||||| ||||| || ||||| || || Sbjct 9333 TTGCTTGCCGGCGAAGATGAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTTGAAT 9392 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | ||| | || |||| ||| || || | ||| | || || || Sbjct 9393 CTTGGTCTTGACGTTCTCGATGGTATCGGAACCCTCGACCTCCAAGGTAATTGTCTTACC 9452 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || |||||||||||||| Sbjct 9453 AGTGAGGGTCTTGACGAAAATCTGCAT 9479 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| || || |||||||| ||| | || ||| | |||||||||| Sbjct 9504 ATGGAGGGTGGACTCCTTTTGAATATTGTAGTCGGAGAGAGTACGACCA-TCCTCGAGCT 9562 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || ||| | || | || || ||||| || || || || |||||||| |||| Sbjct 9563 GCTTACCAGCGAAGATCAAACGTTGTTGGTCAGGTGGAATACCCTCCTTGTCTTGAATCT 9622 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | ||| | ||||| | ||| || |||| |||| ||| || |||| Sbjct 9623 TGGTCTTGACGTTCTCGATGGTGTCAGAACCCTCAACCTCGAGAGTGATGGTCTTACCGG 9682 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || || ||||| ||||| Sbjct 9683 TGAGGGTCTTAACAAAAATTTGCAT 9707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483339935785680