Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq232 291 2e-73 seq2491 140 8e-28 seq32 98.7 2e-15 >seq232 Length=384298 Score = 291 bits (322), Expect = 2e-73 Identities = 606/896 (68%), Gaps = 20/896 (2%) Strand=Plus/Plus Query 110269 ATATTATCGATTATACTCGTGACTATGATATTGACTATTTTGGTTTCAAAACTCTTGAAC 110328 ||||||| |||||| | || | | || || ||||||||||||||||| | || | Sbjct 340214 ATATTAT---TTATACAAGGGATTTTAATTACGATTATTTTGGTTTCAAAACCTTAGAGC 340270 Query 110329 GTGCTTATTTACTTCGTGTCAATGGCGAGATCATTGAACGTCCTCAACACATGTTTCTTC 110388 || ||||| | ||| | || || | ||| | || ||||| || |||||||| | | Sbjct 340271 GTTCTTATCTTCTTAAAATAAACGGAAAAATCGTAGAGCGTCCACAGCACATGTTAATGC 340330 Query 110389 GTGTTGCGATTGGTATTCATGGACATGATATTAAAGCTGTTATTGAATGTTATGATGTAT 110448 ||||| | |||||||||| | | ||| | ||| | || |||||| ||| || || Sbjct 340331 GTGTTTCTGTTGGTATTCACTTAGACGATTTAAAATCGGTAATTGAAACTTACGACTTAA 340390 Query 110449 TAAGTAAAAAGAAAGCTATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAG 110508 | ||||||| || ||||| || || || | ||||| ||||||||| | Sbjct 340391 TGTCTAAAAAGTTCTTTACGCATGCAACGCCAACGTTGTTTAATGCAGGAACTCCAAAAC 340450 Query 110509 GACAATTGGCTTCTTGCTTTCTT-CTAGGAATTAACGATGATTCTATTGAAGGTATTTAT 110567 ||| || ||||||| |||||| || | ||| | |||||| |||||| ||||||||| Sbjct 340451 CGCAAATGTCTTCTTG-TTTCTTACTTGCAATGCAGGATGATAGTATTGATGGTATTTAT 340509 Query 110568 GATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTT 110627 ||| | | ||| |||| || || || | ||||||||||||| || || Sbjct 340510 GATACCTTAAAACAAACCGCAAAAATCTCGCAGTCAGCTGGAGGAATTGGACTTTCTATT 340569 Query 110628 CATGATATTCGCTCAAAAGGAGCAAATAT-CGCAACAGCGAAGGGTGCTTCAACTGGACT 110686 ||| | | || | | ||| | | || ||| | | || || |||||| ||| | Sbjct 340570 CATAACGTACGTGCGACTGGATCTTACATTCGCGGTA-CAAACGGAACTTCAAACGGAAT 340628 Query 110687 TGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGT---AA 110743 |||||| ||||| ||||| |||||||| || || || || ||||||| || || Sbjct 340629 TGTTCCGATGTTGAGAGTTTTCAACGATACAGCGCGTTACGTAGATCAAGGCGGCGGAAA 340688 Query 110744 GAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTT 110803 | || || ||||| || || ||||| | |||||| | ||||| ||||| ||||| Sbjct 340689 ACGTAAAGGTAGTTTTGCAATTTACATCGAAACCTGGCATGCTGATATTTTTGATTTCTT 340748 Query 110804 AGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAAT 110863 || | |||||| |||| |||||| | ||| | |||||||| | || || Sbjct 340749 GGATTTAAAGAAAAATACAGGAAAAGAAGAAATGCGTGCAAGAGATTTATTCTTCGCCAT 340808 Query 110864 GTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTG 110923 ||||| ||||||||| ||||||||||||||||| ||| || | ||| || | ||||| Sbjct 340809 GTGGACTTCAGATTTGTTCATGAAACGTGTTCAGGAAGATTCAACTTGGACTTTAATGTG 340868 Query 110924 TCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGA 110983 ||| || | ||| || ||| |||||| ||||| |||| || ||| | | || Sbjct 340869 TCCAAATGAATGTCCGGGATTATATGATGTTTATGGTGAAGAATTCGAAAAATTATATAC 340928 Query 110984 AAAATATGA-----AAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGG 111038 | | || || |||| || | || | ||| ||| | |||| ||| | ||| Sbjct 340929 AGATTACGAATTTCAAAATAAAGGAA-----GAAAAACAATCCGTGCTCGTGAATTATGG 340983 Query 111039 TTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCAT 111098 |||||||||||||| ||| | ||||| ||||| || ||||| ||||| |||||| Sbjct 340984 GAGAAAATCCTTGAATCTCAAATCGAAACCGGAACACCATATATGTTGTACAAAGATGCA 341043 Query 111099 ATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTG 111154 || || ||||| || || | |||||||||||| ||| ||| ||| ||||| Sbjct 341044 GCAAACCGTAAATCGAACCATAAGAATTTAGGAACTATTCGTTCTTCTAACTTGTG 341099 Score = 168 bits (186), Expect = 2e-36 Identities = 332/489 (68%), Gaps = 13/489 (3%) Strand=Plus/Plus Query 131698 TATTCATAGCGAGATGTATTCATTATTGATTGAGAGTCTTGTTAAAAATGAAGATGATAA 131757 |||||| || |||| ||||| ||||| ||||| | ||| ||| | |||| || || Sbjct 338891 TATTCACAGTGAGACTTATTCTTTATTAATTGATACGTATGTAAAAGACGAAGCAGAAAA 338950 Query 131758 AAATAAATTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGC 131817 | | || ||| ||||| || | |||||||||||||| || |||||||||||||| Sbjct 338951 ATCAGAGTTGTTTAATGCTTTAGAAGTTTTTCCTGCAATTAAGAAAAAAGCAGAATGGGC 339010 Query 131818 TATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTG 131877 | | |||||||| || |||||| ||| || |||||| | ||||||||| Sbjct 339011 TTTAAAATGGATCGAATCTGATTC------ATTTGCTGAAAGACTAATTGCTTTTGCTGC 339064 Query 131878 TGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGG 131937 |||||||| || || || || || ||||||||| | || | |||| | || || ||||| Sbjct 339065 AGTTGAAGGAATCTTTTTCTCGGGAGCTTTCTGTTCAATTTATTGGTTGAAAAAACGTGG 339124 Query 131938 ATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATAC 131997 || ||||| || | |||| || ||| |||| || || | || |||| | ||| Sbjct 339125 TTTAATGCCAGGTTTAACATTCTCTAATGAATTGATTTCTCGTGACGAAGGTGTACATTG 339184 Query 131998 TGAATTTGCTATATTAATCTATAGAA----AATTTGCTGATAAACTTGATGAAA-ATAAT 132052 ||| ||||| || | || | || ||||| | | || || ||| ||| Sbjct 339185 TGATTTTGC--GGTTCACCTGCACAATCACCATTTGGTAAACAAAGTGCCAAAAGATAGA 339242 Query 132053 ATTAAACAACTTATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTATTACAGAAGCTTTG 132112 |||||| || |||| ||| || | |||||||| | | ||||| |||||| || | Sbjct 339243 ATTAAAGAAATTATTGTCGATGCTTTAGATATCGAAAGACAATTTATCACAGAATCTCTT 339302 Query 132113 CCTTGCAATTTGATTGGGATGAATGCTGACTCTATGAAGGAGTACATTGAATTCGTTGCT 132172 || | ||| ||||| ||||| |||| ||||| |||| | || |||||||| Sbjct 339303 CCGGTAAGTTTAATTGGTATGAACGCTGGTCTTATGACACAGTATTTAGAGTTCGTTGCC 339362 Query 132173 GATCGTTTA 132181 ||| | ||| Sbjct 339363 GATAGATTA 339371 >seq2491 Length=10632 Score = 140 bits (154), Expect = 8e-28 Identities = 543/845 (64%), Gaps = 9/845 (1%) Strand=Plus/Plus Query 110301 GACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATC 110360 || |||||||| || ||||| |||||| | ||| | || | | || | || Sbjct 5466 GATTATTTTGGGTTTAAAACCCTTGAAAAATCCTATCTGCTGAAAATAGAAGGACAAATT 5525 Query 110361 ATTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATT 110420 | ||||| || ||||| ||||| | |||||||| | || ||||| | | |||||| Sbjct 5526 GTAGAACGCCCGCAACATTTGTTTATGCGTGTTGCCGTAGGGATTCACAAAGAAGATATT 5585 Query 110421 AAAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCT 110480 || || |||| | ||| | | | ||| | || ||||| || || Sbjct 5586 GAAAGTGCGATTGCAACGTATAACCTGATGAGTGAGCGCTGGTTTACGCATGCAACCCCA 5645 Query 110481 ACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATT 110540 || ||||||| |||| || | | ||| || |||| |||||| | || || Sbjct 5646 ACTTTATTTAATGCAGCTACCCCTAAACCTCAAATGTCTTCCTGCTTTTTACTGACCATG 5705 Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAA 110600 | || || ||||||||| ||||| ||| || | ||| |||| ||| ||||| || Sbjct 5706 CAGGACGACAGTATTGAAGGAATTTACGATACTTTAAAACAAACCGCTAAAATTTCACAA 5765 Query 110601 AACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCA 110660 | | | || || |||||| | | | ||| | || || | | ||| | |||| | Sbjct 5766 AGCGCAGGTGGTATTGGTTTAAGCATCCATAACATCCGTGCCACGGGATCTTATATTGGT 5825 Query 110661 ACAGCGAA-GGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGC 110719 | | || ||| | ||| ||| |||| || ||||| | ||| || ||||| || || Sbjct 5826 GGAACAAACGGGACCAGCAATGGGA-TTGTACCTATGTTGAAAGTATTTAACGATACCGC 5884 Query 110720 AAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACC 110776 |||||| | || ||||| ||| | || || | ||||| || || || || || Sbjct 5885 CCGTTATGTGGACCAGGGTGGAGGTAAACGTAAAGGTGCTTTTGCCATTTACCTGGAGCC 5944 Query 110777 TTGGCATTCAGATATATTTGAATTCT-TAGAACTTCGTAAAAATCAAGGATTTGAAGAAC 110835 |||||| ||||| | | || || | | || || |||||||| || || ||||||| Sbjct 5945 ATGGCATGCAGATGTGCT-GAGTTTTCTGGACCTGCGTAAAAACCATGGTAAAGAAGAAC 6003 Query 110836 AAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTC 110895 | || | |||||||| ||||| | ||| | | || | ||||||| | | || Sbjct 6004 TTCGTGCCAGAGATTTATTCTATGCCCTTTGGGTATGTGACCTGTTCATGAGAAGGGTAG 6063 Query 110896 AAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTAT 110955 ||||||| || ||| | | | ||||||||| | || || || | ||| | Sbjct 6064 AAGAAAACGGAGACTGGAGTTTATTCTGTCCTCATGAAGCCCCGGGACTGGCAGATTGCT 6123 Query 110956 ATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTC-GCAAA 111014 ||| ||| || || | | || || || ||||||||||| | || | | ||| Sbjct 6124 TTGGTGCAGAATTCGATGCTTTATATGAGCGTTACGAAAAAGAAGG-ACGTGCCCGTAAA 6182 Query 111015 CAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACT 111074 ||| ||| ||||| |||||||| || || || ||||| ||||||| ||||| Sbjct 6183 ACCATTAAAGCACAAGAGCTTTGGTTTGCCATTCTGGATTCACAGATTGAAACCGGAACC 6242 Query 111075 CCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134 |||||| | |||||||||||| || ||||||| || || ||||||||||| Sbjct 6243 CCTTATCTGTTGTATAAAGATGCAGCAAACAGCAAATCCAACCAGCAAAATTTAGGAACC 6302 Query 111135 ATTAA 111139 || || Sbjct 6303 ATCAA 6307 Score = 111 bits (122), Expect = 4e-19 Identities = 160/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 112599 AACCTAAATAAAATTATTGA-CAAAACGACCTATCCAATTCAAAAAGCAAAACATTCTAA 112657 ||||| |||||||||||||| || || | ||||| | | |||| ||| |||| || Sbjct 6459 AACCTGAATAAAATTATTGATCATAATTAT-TATCCGGTAGAGGAAGCTAAAAATTCCAA 6517 Query 112658 TAACAAGCATAGACCAATTGGCATTGGCGTACAAGGATTAGCTGATGTATTTATGATGAT 112717 | || |||||| |||| | || ||||| ||||| || |||| ||||| |||| Sbjct 6518 CATGCGCCACAGACCAGTTGGTTTAGGTGTACAGGGATTGGCAGATGCTTTTATCCTGAT 6577 Query 112718 GCGAATTCCTTTTGATTCTGACCGTGCTAAATTCTTAAATGAAAAGATTTTCGAAACAAT 112777 ||| | || ||||| ||| | || ||| | |||||| || | ||||| ||||| || Sbjct 6578 GCGTTTACCATTTGAAAGTGAAGGGGCAAAAATTTTAAATAAAGAAATTTTTGAAACGAT 6637 Query 112778 CTATTTCGCTGCTATGACTGAATCTAATGAACTTGCTATTAAA 112820 ||||||||||| ||||| | || |||| || ||| ||||| Sbjct 6638 TTATTTCGCTGCCATGACGGCCTCACATGACCTGGCTGTTAAA 6680 >seq32 Length=13759 Score = 98.7 bits (108), Expect = 2e-15 Identities = 386/600 (64%), Gaps = 9/600 (2%) Strand=Plus/Minus Query 110301 GACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATC 110360 |||| ||||| ||||| || | || ||| | || || | || |||| ||||||||| Sbjct 4602 GACTTCTTTGGCTTCAAGACATTGGAGCGTTCCTACTTGCACCGCATCAACGGCGAGATC 4543 Query 110361 ATTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATT 110420 || || ||||| |||||| | || | ||||| | ||||||| || || | || ||| Sbjct 4542 ATCGAGCGTCCCCAACACCTCTTGATGCGTGTGTCCCTTGGTATCCACGGCGACGACATT 4483 Query 110421 AAAGCTGTTATTGAATGTTATGATGTATTAAGTAAAA-AGAAAGCT-ATTCATGCTACTC 110478 | |||| || | || | | || || | | ||| | | | |||||| |||| Sbjct 4482 GAGGCTGCCATCGGCACCTACCACCTCTT--GTCACAGAGATACTTCACTCATGCCACTC 4425 Query 110479 CTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAA 110538 | ||||| || || || || || || || | || ||||| || | || Sbjct 4424 CCACCCTGTTCAATGCTGGCACCCCCTATCCCCAGATGTCCTCCTGCTTCCTCGTCCAAA 4365 Query 110539 TTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTA 110598 | || || || || || || ||||| || || | || || || |||||| || || | Sbjct 4364 TGAAGGACGACTCCATCGAGGGTATCTACGACACACTCAAGCAATGTGCTCTCATCTCCA 4305 Query 110599 AAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC- 110657 | ||||||| ||||| ||| || || | || || | | | | ||| Sbjct 4304 AGTCTGCTGGAGGCATTGGCATTGCTGTGCACAAGATCCGTGCTGCCCGCTCCTACATCC 4245 Query 110658 GCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACT 110717 || || | | || || |||| || || || || ||| | | || |||||||||||| Sbjct 4244 GCGGCACCAACGGCACCTCCAAC-GGTCTAGTCCCCATGCTCCGTGTGTTCAACGACACT 4186 Query 110718 GCAAAATATGTGAATCAAGGT---GGTAAGAGAAATGGCTCATTTGCTATCTATCTCGAA 110774 || ||||| | |||||| || ||| | || || ||||||| |||| ||||| Sbjct 4185 GCCCGCTATGTCGACCAAGGTGGCGGAAAGCGCAAGGGTGCATTTGCAGTCTACCTCGAG 4126 Query 110775 CCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAA 110834 || ||||| | || | ||||| ||| | || || || || || || || || || Sbjct 4125 CCATGGCACGCCGACGTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAG 4066 Query 110835 CAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTT 110894 | || ||||| || || ||||| | |||||| ||||| | |||||| | |||||| Sbjct 4065 ATGCGTGCTCGTGACTTGTTCTATGCCCTCTGGATTCCAGATCTCTTCATGGAGCGTGTT 4006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186609312786102