Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_024787.1 Length=132541 Score E Sequences producing significant alignments: (Bits) Value seq3818 118 9e-22 >seq3818 Length=586 Score = 118 bits (130), Expect = 9e-22 Identities = 325/493 (66%), Gaps = 4/493 (1%) Strand=Plus/Plus Query 99243 CAATCATCTATCTTAGAGGGTATTAATTTCTACAGCGGTTTTGCTTACTTCTATAACCTT 99302 || || || ||| | || || || || ||||| ||| || || | ||||| ||||| Sbjct 94 CAGTCGTCGATCCTGGAAGGCATCAACTTCTATTCCGGCTTCGCGTTTTTCTACAACCTG 153 Query 99303 GTTCGTCAAAACAAGATGACGGGAACAGGTAAAATCATTAGCTTCATTAATCGTGATGAG 99362 || || || ||| ||||| || || || || ||||| |||||||| || || || || Sbjct 154 GTCCGCCAGAACCGCATGACCGGCACCGGCAAGATCATCAGCTTCATCAACCGCGACGAA 213 Query 99363 TTAGCCCATTCGAAGTTTATTTCTGAGCTAATTAGAGCTATTGTAGGGGAAAACCCTGAA 99422 | ||||| | ||||| || || || || | || || | || || |||| | Sbjct 214 CTGGCCCACACCAAGTTCATCAGCGAACTGATCCGCGCCATCATCGGCGAGAACCAGCAG 273 Query 99423 CTACAAACAGATGAACTAAATGACTACGTGTATGCTTCTTTTAGACATGCCGTAGAGCTA 99482 || || || | || | | |||||| | | | | || |||||| | | ||| Sbjct 274 CTTCAGGGCGACCAGCTCACCGCTTACGTGCACGATGCATTCGAGCATGCCATCGCGCTG 333 Query 99483 GAACAAGCG-TGGTCTAGTGAGGTACTACAGGGCATTGAAGGAATTGATGTGGAAGAAAT 99541 ||| | ||| ||| | | ||||| || | ||||| || || || || ||||| || || Sbjct 334 GAA-ACGCGCTGGACCGGCGAGGTGCTGGACGGCATCGACGGCATCGACGTGGACGAGAT 392 Query 99542 GTTAGACTATGTAAAATATCGTGCTAATAAAATGTTAGGGATGCTAGGTCTCCAACCAAT 99601 | | ||| || || || || || || || ||| || ||||| || || | | Sbjct 393 GATCCGCTACGTGAAGTACCGCGCCAACAAGATGGCCGGCATGCTCGGCATCGAGAAGCT 452 Query 99602 GTATCAAGGTCATACA-GAAAATTCTATGACATGGATTAAAGCTTACGCCGATAATTTTA 99660 ||| || | || | | || ||| | ||||| || || || ||||| ||||| | Sbjct 453 GTA-CAGCGACACCAACGTCAACGTGATGCCGTGGATCAAGGCCTATGCCGACAATTTCA 511 Query 99661 CAGAAACAAAAACCGACTTTTTCGAAATGCGTAACTCTAGTTACAAGAAAACAAATTTAG 99720 | || || || |||||||| ||||| ||||| ||| | ||||||||||| || |||| | Sbjct 512 CCGAGACCAAGACCGACTTCTTCGAGATGCGCAACGCCAGTTACAAGAAGACCAATTCGG 571 Query 99721 ATAATGGGTTCGA 99733 | || || ||||| Sbjct 572 ACAACGGCTTCGA 584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423937247471204