Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_025414.1 Length=178171 Score E Sequences producing significant alignments: (Bits) Value seq1087 86.0 7e-12 >seq1087 Length=202632 Score = 86.0 bits (94), Expect = 7e-12 Identities = 131/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 40086 TCGCGGGATC--ATCGTTTCCGCATGGAACCCTGTTGATC-TGGATAAAATGGCATTGCG 40142 |||||| || ||||||||||||||||| || | | || | ||| ||||||| ||| Sbjct 83585 TCGCGGCGTCTGATCGTTTCCGCATGGAATCCGGC-GCTCGTCGATGAAATGGCGCTGCC 83527 Query 40143 TCCGTGTCACTGTTTCTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAGTGGTA 40202 || || ||||| | ||||||||| ||| | |||| || || || ||| || Sbjct 83526 GCCCTGCCACTGCCTGTTCCAGTTCTACGTGGCCGACGGAAAGCTTTCCTGCCAGCTCTA 83467 Query 40203 TCAGCGTTCGGTTGATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGCTCTCCT 40262 ||||| || | ||| |||| | || |||||||||||||||| ||||| || || || Sbjct 83466 CCAGCGCTCCGCCGATATCTTTCTCGGCGTGCCGTTCAATATCGCATCCTATGCCCTGCT 83407 Query 40263 GAC 40265 ||| Sbjct 83406 GAC 83404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569923850038320