Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_025416.1 Length=141907 Score E Sequences producing significant alignments: (Bits) Value seq232 149 6e-31 >seq232 Length=384298 Score = 149 bits (164), Expect = 6e-31 Identities = 390/587 (66%), Gaps = 21/587 (4%) Strand=Plus/Plus Query 134191 GACTTCTTAGAATCTTATTACAATGCAGATGTAGAAAAGGAAATAGTTGTTGCTTCTATC 134250 || ||||||||| ||||| || || || ||| || ||| | || | | ||| || Sbjct 85412 GATTTCTTAGAAGAATATTATAACGCCAATTCAGACAAAGAATTGGTGGCAGGTTCAGTC 85471 Query 134251 CCTGCTACTGAGCATTCAGTTATGTGTGCAAACGGTGATTATGAAACAATGGATGAGTAC 134310 |||| || || ||||| || ||||| | || || | || | || | ||||||| Sbjct 85472 GCTGCAACAGAACATTCTGTAATGTGC----ATGG-GA--ACGACAGAAGG--TGAGTAC 85522 Query 134311 AAGACATACAAACGTATGTTAACAGAAATTTACCCAACAGGAATATTTTCTATTGTATCC 134370 | || | |||| | | | |||||| |||| |||| |||||| ||||||| || || Sbjct 85523 GAAACCTTCAAAAGATTAATTACAGAAGTTTATCCAAAAGGAATTGTTTCTATCGTTTCT 85582 Query 134371 GATACGTGGGACTTTTGGGGTAATATGACTAAAACTTTACCT----AGACTAAAAGATAT 134426 ||||| ||||| || ||| | | | ||| | |||||| ||| ||||||| Sbjct 85583 GATACTTGGGATTTATGGAA-AGTTT---TAACAGATTACCTCCCAAGATTAAAAGAAGA 85638 Query 134427 TATTATGGAACGTGATGGGAAAGTAGTAATCAGACCTGATAGTGGAGACCCTGTTAAGAT 134486 ||| | | || || ||||| || || | ||||| ||||| || || || || Sbjct 85639 TATCGTTTCTAGAGAAGGAAAAGTGGTTATTCGTCCTGACAGTGGTGATCCAATTTTAAT 85698 Query 134487 TATTTGTGGTGACCCTGACGCAGATACTGAGTATGAACGTAAAGGTGCTGTAGAGGTACT 134546 ||| || || | ||||||| | | || || | || ||||| | | | || | || Sbjct 85699 TATCTGCGGAAATCCTGACGGAAAAACAGAACAAGAGAAAAAAGGAGTTATCGAATTGCT 85758 Query 134547 TTGGGATACTTTTGGAGGTACTGAAACTGAAAAAGGATATAAATTACTAGATGAACATGT 134606 ||||||| |||||| || || || || ||||| | ||| | | | | ||| | Sbjct 85759 TTGGGATGTTTTTGGTGGAACGACAAACGATAAAGGTTTCAAAGAATTGGTTCCACAAAT 85818 Query 134607 AGGATTAATTTATGGAGACTCTATTAACTATGAGCGTGCACAAC--AAATTTGTGAAGGA 134664 ||| ||||||||| || ||||| | ||| | |||| |||| || || || Sbjct 85819 CGGAGCAATTTATGGCGATAGTATTACCGT--AGCAAGAGCAACTGAAATCTGCGAGAGA 85876 Query 134665 TTAAAAGAAAAAGGTTTTGCAAGTATTAACGTTGTATTAGGTGTAGGTAGTTTCTCTTAC 134724 ||||||| ||||||||||| || ||||| || ||||| | || |||| | || Sbjct 85877 TTAAAAGCGAAAGGTTTTGCTTCTACAAACGTGGTTTTAGGAATTGGATCTTTCACGTAT 85936 Query 134725 CAGTTTAATACTCGTGATACTCATGGTTTTGCAATCAAAGCAACCTA 134771 || | ||||| ||||||||| |||||||||||| |||||||| || Sbjct 85937 CAATACAATACACGTGATACTTTTGGTTTTGCAATGAAAGCAACTTA 85983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 453898461432240