Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq444 98.7 9e-16 >seq444 Length=38654 Score = 98.7 bits (108), Expect = 9e-16 Identities = 155/221 (70%), Gaps = 1/221 (0%) Strand=Plus/Plus Query 25164 AATTAAACAACA-TGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAA 25222 |||||||||||| ||||| | ||||| ||||| | || || || | || || | || Sbjct 4805 AATTAAACAACAATGCAAATCTTTGTTAAAACTCTGACAGGCAAGACTATTACCTTGGAG 4864 Query 25223 GTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATA 25282 ||||| | ||||||||||||| | || || || || || || ||||| || Sbjct 4865 GTCGAGGGTTCCGATACTATCGAGAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATT 4924 Query 25283 CCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTC 25342 || || || || ||| | ||||| | | |||||| ||||| || |||| | | | | || Sbjct 4925 CCACCTGACCAACAACGTCTCATCTTTGCCGGCAAGCAACTTGAGGATGGTCGTACTCTC 4984 Query 25343 AGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||||||||| || ||||| || ||||| |||| || || Sbjct 4985 TCCGATTACAACATCCAAAAGGAGTCCACTCTTCACTTGGT 5025 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || | || || || | ||||| | || ||||||| | Sbjct 5273 ATGCAAATCTTCGTCAAGACCCTCACTGGTAAGACCATCACCCTTGAGGTCGAAGGTTCC 5332 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||||||| | || || || || || || |||||||| || || || || Sbjct 5333 GATACTATCGAGAACGTCAAGACCAAGATCCAAGACAAGGAGGGTATCCCACCTGACCAA 5392 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | ||||| | | |||||| ||||| || |||| | | | | || ||||||||| Sbjct 5393 CAACGTCTCATCTTTGCCGGCAAGCAACTTGAGGATGGTCGTACTCTCTCCGATTACAAC 5452 Query 25355 ATTCAAAAAGAATCCACCATTCAT 25378 || ||||| || |||||| | ||| Sbjct 5453 ATCCAAAAGGAGTCCACCCTCCAT 5476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445019946834240