Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1087 149 7e-31 seq5955 127 2e-24 >seq1087 Length=202632 Score = 149 bits (164), Expect = 7e-31 Identities = 193/267 (72%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 146924 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCT 146983 |||| | |||||| |||| ||||| || ||||| ||||| || || || ||||||| Sbjct 83315 GCTCGAAATGGTTGGCATAGAGATGCGCATCGCCCAGCGTGTGAACGAAATCACCCGGCT 83374 Query 146984 TAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGG 147043 || || || || || ||||||||| ||| ||||| | ||| || || ||||| | Sbjct 83375 GCAGACCCGTGACCTGCGCCACCATGAGGGTCAGCAGGGCATAGGATGCGATATTGAACG 83434 Query 147044 GGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGG 147103 | || || || || || | || | |||||| |||||||| || |||| ||||||| Sbjct 83435 GCACGCCGAGAAAGATATCGGCGGAGCGCTGGTAGAGCTGGCAGGAAAGCTTTCCGTCGG 83494 Query 147104 CCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163 ||||||| |||||| ||||| |||||| |||||||||||||| | | | ||| | Sbjct 83495 CCACGTAGAACTGGAACAGGCAGTGGCAGGGCGGCAGCGCCATTTCATCGACGAGCGCCG 83554 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCC 147190 | ||||| || || || | ||| |||| Sbjct 83555 GATTCCATGCGGAAACGATCAGACGCC 83581 >seq5955 Length=632 Score = 127 bits (140), Expect = 2e-24 Identities = 186/263 (71%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 146926 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTA 146985 || ||||| ||| ||||||||| ||| || || || ||||| || |||| Sbjct 184 TCGACGTGATTGTCGTAGACGTGGCAGTCTCCGCCCGTCCAGACGAAGTCTCCGGGCTCG 243 Query 146986 AGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGG 147045 ||||| | ||||| | ||| ||| |||| | |||| ||| |||||||| || Sbjct 244 AGGCCCACCTGCTGGGCGATCATCATGGTCAGCAAGGCGTAGGAGGCGATGTTGAACGGC 303 Query 147046 ACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCC 147105 || || ||| |||||| | | ||| |||||||| |||||||||| |||||||| Sbjct 304 ACACCGAGGAACATGTCGGCGCTGCGCTGATACAGCTGACACGAGAGCTTGCCGTCGGCG 363 Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165 ||||| |||||| |||| ||| || |||| ||||||||| | || | ||| || ||| Sbjct 364 ACGTAGAACTGGAACAGCGCGTGACAGGGCGCGAGCGCCATGTCCGGGATGTCGGCCGGG 423 Query 147166 TTCCAGGCCGAGACCACCAGCCG 147188 |||||||| || || | ||||| Sbjct 424 TTCCAGGCAGACACGATGAGCCG 446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583390397044800