Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_026594.1 Length=56537 Score E Sequences producing significant alignments: (Bits) Value seq8098 131 6e-26 seq1087 122 3e-23 >seq8098 Length=417 Score = 131 bits (144), Expect = 6e-26 Identities = 205/291 (70%), Gaps = 2/291 (1%) Strand=Plus/Plus Query 36794 TCGTCATCACTCGCCCCGCCGTCGAGGCCGAGGAGAAGCTCGGCTACCTGCCCGGCGGCA 36853 || || |||| || |||||||||||||| | |||| |||||| | ||| |||||| | Sbjct 27 TCATCCTCACCCGTCCCGCCGTCGAGGCGGGGGAGCGGCTCGGGTTCCTCCCCGGCACCC 86 Query 36854 TCGAAGAGAAGATGGCTCCGTACCTGATCCCGATGCTGGACGCGGTGATCGACCTGGTTG 36913 || || ||||| | |||||||||| |||| || |||||| ||| ||| || | | Sbjct 87 TCACGGACAAGATCGATCCGTACCTGCGCCCGCTGTACGACGCGCTGAACGAGATGATGG 146 Query 36914 GCCCGACGATGGCCAAGCGCCTGCAGGAGACCCGCCAGCTCGAGATCGCCCCGCTGGCCT 36973 ||| ||| | ||| ||| || ||| || | |||| |||||||||| |||| Sbjct 147 ACCCCGAGATCGTGCCGCGACTGATGGCGACGGGCACGATCGAAGTCGCCCCGCTCGCCT 206 Query 36974 ACATGCGAGGCCGAACCTTCAACGACACGTTCCTCATCGCCGACGAGATGCAGAACGCCA 37033 ||||||| ||||| ||| |||||||| | ||| | | ||| ||| ||||||| | | Sbjct 207 ACATGCGCGGCCGCACCCTCAACGACTCCTTCGTGGTGCTCGATGAGGCGCAGAACACGA 266 Query 37034 C-CCCGCGACAGGCCGCGCTGCTGGTGACCCGCCTGGGCTTCGGAACGCGG 37083 | |||| | ||| | || | | || ||||| |||||||| || ||| Sbjct 267 CTCCCGAG-CAGATGAAGATGTTCCTCACGCGCCTCGGCTTCGGCACACGG 316 >seq1087 Length=202632 Score = 122 bits (134), Expect = 3e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 4517 AAGGCCAAGCTCCTGATCGTGGACGAGTCGTCCATGGTCGACGAGTCGGTCGGTGAAGAC 4576 ||||||||||| | |||| ||||||| || ||||| ||||| | |||| || Sbjct 68772 AAGGCCAAGCTGATCGTCGTCGACGAGTGCTCGATGGTGGACGAACAGCTCGGCCGCGAT 68713 Query 4577 CTCCTGTCGTTCGGTGTGCCAATCCTCGCCCTGGGCGACCCCGCCCAGCTGCCGCCGGTG 4636 ||| || ||||| || || || | ||||||||||| | |||||||||||| | Sbjct 68712 CTCATGAGCTTCGGCACCCCCATTCTGGTGCTGGGCGACCCTGGCCAGCTGCCGCCCATA 68653 Query 4637 GCCGGGGCTGGATTCTTCACCAAGCAGAAGGCCGACTTCCTGCTGACCGACATCCACCGC 4696 |||| | || ||||||||| | || || | || |||||||| | ||| |||||||| Sbjct 68652 TCCGGCGGCGGCTTCTTCACCGAACACGAGCCGGATTTCCTGCTCAGCGAAATCCACCGG 68593 Query 4697 CAGGCCCGCGACAACCCCATCATTGAGATGTCGCGCATCGTCCGCGAGGG 4746 ||||| ||||||||||| ||| | || ||| | ||| |||||||| Sbjct 68592 CAGGCGCGCGACAACCCGATCCTGCGCCTGGCGCTCGACGTGCGCGAGGG 68543 Score = 91.5 bits (100), Expect = 5e-14 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 4173 TTTTCCGCCTGTTCGGGTATGCCGGCACGGGCAAGACCACCCTGGCCCGCCACATCGCTG 4232 |||| || || ||||| |||||||| || |||||||| || ||||||||| | |||||| Sbjct 69032 TTTTTCGGCTTTTCGGCTATGCCGGTACCGGCAAGACGACGCTGGCCCGCTATTTCGCTG 68973 Query 4233 AGAACGTGGACGGGCTTGTGCTGTTCGCCGCCCCGACCGGCAAGGCCGCCTACGTCCT 4290 || | | ||||| |||| ||||||||| |||||||||||||| | ||||| Sbjct 68972 AGCATATTGACGGCGACGTGCAGTTCGCCGCTTTCACCGGCAAGGCCGCGCAGGTCCT 68915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180768069354516