Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_026608.1 Length=42093 Score E Sequences producing significant alignments: (Bits) Value seq368 89.7 1e-13 >seq368 Length=91977 Score = 89.7 bits (98), Expect = 1e-13 Identities = 206/307 (67%), Gaps = 5/307 (2%) Strand=Plus/Minus Query 38810 CGGCGAATACTTCGATTGGTATTACTTGAACGCA-GCCGACCGGGCCGCGCAAATCCGCA 38868 ||||||| || || |||||||| | | || | || || || |||||| |||| Sbjct 80208 CGGCGAAGGTTTTGACTGGTATTA-TGCATCGGATGCGGATCGAACCGCGCGGCGGCGCA 80150 Query 38869 CGCCTATTACCGACGGTGCCTACGGTAAACCATGGGTATTCCGCAACAAAGACTTCCGTT 38928 |||| || |||||||| | || || | ||||| | |||| |||| ||| || Sbjct 80149 CGCCGATCACCGACGGATCG---GGCAAGGCGTGGGTCTACCGCTACAAGGACATCGAGG 80093 Query 38929 CTTGGTGGAATAACTACCATTACAACCGCCCCGGCTACGTCGAAGACGCTTCGCCGACGG 38988 | |||||||| ||| |||||||||||| ||| |||||| ||| | |||| Sbjct 80092 CCTGGTGGAAAAACCCGCATTACAACCGCAAGGGCGGCGTCGAGAGCGCCAATGCCACGG 80033 Query 38989 GTTGGGTTCCTAATTCAAAGCCGATTTGGTTTACTGAATTCGGCTTTCCTGCGGTCGATA 39048 ||| |||| |||||||| ||| | || ||| | |||| ||| || ||||| | Sbjct 80032 CGTGGCAGCCTATGGGTAAGCCGATCTGGCTGACGGAACTGGGCTGTCCGGCAGTCGACA 79973 Query 39049 AAGGCACCAATCAACCAAACGTTTTCTACGACCCTAAGTCTTCCGAAAGCGCCTACCCCT 39108 | ||| ||||||| || || || || ||| | ||||| ||||| | || | || | Sbjct 79972 AGGGCCCCAATCAGCCCAATGTCTTTCCCGATGCCAAGTCCTCCGAGGGGGCGTTTCCGT 79913 Query 39109 ACTTTTC 39115 | ||||| Sbjct 79912 ATTTTTC 79906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134554614359620