Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_027296.1 Length=53721 Score E Sequences producing significant alignments: (Bits) Value seq136 87.8 6e-13 >seq136 Length=398197 Score = 87.8 bits (96), Expect = 6e-13 Identities = 196/290 (68%), Gaps = 11/290 (4%) Strand=Plus/Plus Query 36344 CCATGCACATATGC-CGGCATTTGAGCAAGACGCCGACGCCGCGCGGTTTGAGCTCGGAT 36402 |||||||||||||| |||| | || || || | | ||||||||||| ||| || Sbjct 47576 CCATGCACATATGCTCGGCCTC-GATCATGATGGCCACGCCGCGCGGACGCAGC---GAC 47631 Query 36403 TCGAAAAGCGCGTTGGCGATCTGCACCGTCAATCGTTCCTGAACCTGGAGGCGTCGAGCG 36462 | | ||| ||||||||||| | |||| | ||||| ||| ||||| || || Sbjct 47632 CCCTGGATCGCATTGGCGATCTGGGCTGTCATGCTCTCCTGCGTCTGCAGGCGGCGGGCA 47691 Query 36463 AACACGTTAGCCACTCGGCTGAGTTTCGAAAGCCCAAGAACGCGC---CCATCCGGAATG 36519 | | | | || ||| || ||||| || || | || | ||||| || | Sbjct 47692 TAGATATGCACGACGCGGGCGATCTTCGACAGGCCGACCACTTTCTCGCCATCGGGCAGA 47751 Query 36520 TAAGCAATAGTCGCCGTGCCGAAGATGTCGGCAAGGTGATGCTCGCATTTCGAATAGATC 36579 || || | | |||| |||||| |||| | | |||||||||||| | |||| ||| | Sbjct 47752 TAGGCGACATGCGCCTTGCCGATGATGGGAACCATGTGATGCTCGCAGTGCGAAAAGAAC 47811 Query 36580 GGAATGTCCTTGACCAAGACCATCTCGTCATA---GGCACCTTCCTCGAA 36626 || |||||||||| ||||| || |||||||| |||| |||| || || Sbjct 47812 GGTATGTCCTTGATGAAGACGATGTCGTCATAACCGGCAACTTCTTCAAA 47861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171758301335572