Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_027983.1 Length=167435 Score E Sequences producing significant alignments: (Bits) Value seq93 98.7 1e-15 >seq93 Length=584700 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 142123 ATTTGTGCTTCCTGATAAAAACCAAAGCAGCTCAGCAATGCAAGCTTTCCAGGCGAGCTT 142182 |||||| |||| |||||||||||||| || ||| | ||| | ||| || Sbjct 272758 ATTTGTATCTCCTTTTAAAAACCAAAGCAATTCGTAGATGATCGATTTTAAATGGAGTTT 272817 Query 142183 CTTAGTTGTTACCGCAGGAAAACCTTTAGTTAAATCCCAGCGCAATTTAGTACCGAACAA 142242 || || || ||| || ||||||| | ||||||| | |||| | | ||| | || || Sbjct 272818 TTTTGTCGTAACCATTGGGAAACCTTCACTTAAATCAAAACGCA-TCTGGTAGCCAAAAA 272876 Query 142243 AGCAATT-GTTCCTGTGCCTGTTCGGTCATCGGTTTCATAGCCATTTTCAAAAATGTCTT 142301 | || |||||||| |||||||||||| | ||| || ||| ||||| |||| || || Sbjct 272877 CACTTTTCGTTCCTGTTCCTGTTCGGTCACCTTTTTGATTGCCGTTTTCTAAAACGTATT 272936 Query 142302 TAATTAAATCTTGGTATTGTTTCATT 142327 | | ||||||| ||||||||||||| Sbjct 272937 TTACTAAATCTAAGTATTGTTTCATT 272962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535574396804400