Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq6167 114 3e-21 >seq6167 Length=616 Score = 114 bits (126), Expect = 3e-21 Identities = 135/181 (75%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 41199 GGCAACGATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCTAATCTAAGCA-- 41256 ||||| ||||| ||| |||||||||| || | ||| ||||| || || || || ||| Sbjct 237 GGCAATGATCCGGAAGTCCGTTACATCCCCAACGGGGGCGCAGTGGCAAACCT--GCAGG 294 Query 41257 TCGCCACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAACAAACGGAAT 41316 ||||||| | ||||||||| || ||| || || |||| | || || ||||||| Sbjct 295 TCGCCACGTCAGAAAGCTGGCGTGACAAACAGACGGGGGAGATGCGGGAGCAGACGGAAT 354 Query 41317 GGCACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGCTAGCGAATACCTGCGCAAAG 41376 |||||||||| || | ||||| ||||| || ||| | ||| | ||||| |||||||| | Sbjct 355 GGCACCGCGTGGTGCTGTTCGGCAAGCTCGCGGAAGTGGCTGGTGAATATCTGCGCAAGG 414 Query 41377 G 41377 | Sbjct 415 G 415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133188431495952