Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_028701.2 Length=33509 Score E Sequences producing significant alignments: (Bits) Value seq3418 95.1 3e-15 seq3006 82.4 2e-11 >seq3418 Length=506 Score = 95.1 bits (104), Expect = 3e-15 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 411 GGCGGCACACGGTGCGCGGCTAACAGGTCGTCGCGGGTGGCGTCTTTGATGCCGGTAAAC 470 |||||||| || |||| || | || ||||||||| || || | |||||| || ||| Sbjct 475 GGCGGCACGCGCAGCGCCGCCAGCATGTCGTCGCGCGTCACGCCCTTGATGTTGGCGAAC 416 Query 471 TCATCCTTCGCCGCCACCTGGCTGAACGGCATAATTTGCAGGCCGTCTTTTTTCCCGCCC 530 |||||||| |||||||||| ||| | ||| || || ||||| |||||||| || ||| Sbjct 415 TCATCCTTGGCCGCCACCTCGCTCACCGGGATGATCTGCAGACCGTCTTTCTTGCCGTTG 356 Query 531 GCCGCGTAGACAAACAGGTT 550 | || | || |||||||| Sbjct 355 GGCGAATGCACGAACAGGTT 336 >seq3006 Length=629 Score = 82.4 bits (90), Expect = 2e-11 Identities = 193/291 (66%), Gaps = 3/291 (1%) Strand=Plus/Minus Query 19759 ACCAGCGACGGGGTAAGCGGTTTATCAACATAGTAGAAGTGGGCTTCAGCGACGGTATCA 19818 |||||||| ||| ||||| || || || ||| || || || || |||| ||| || Sbjct 307 ACCAGCGAGGGGTGCAGCGGCTTGTCGACGTAGACCAACTGCGCCTCGGCGATGGTGTCG 248 Query 19819 GCAACGATCTGCGCGGTTCGGGTATAACTTTCGAAGATGTAC---GTTTCCTTGTCGCAG 19875 || | ||||||||| || ||||| | | |||||| || | || | | |||| Sbjct 247 GCCAGGATCTGCGCCGTGCGGGTGGAGGTCTCGAAGGCAAACAGCGGCTCATCGCTGCAG 188 Query 19876 GTACGCGATCCCCAGATGCGGTAGCCGTCCTGCTTGATCAGCGTGGTAACGCCTGCCGCA 19935 || ||||||||||||| ||| |||| |||||||||||||| | | || ||| Sbjct 187 GTGCGCGATCCCCAGAACTTGTACCCGTTGGAGTTGATCAGCGTGGTGATATCGGCGGCA 128 Query 19936 TTCAGTTCGTCAGCGTCGGTATCGGTGCCCTGCAACGTGAAATAGATGTCCCGATCCATC 19995 || || | | |||||||| | | |||||| ||| || |||||| || Sbjct 127 TTGAGCATGCCGGCGTCGGTCGCCGGATCCTGCAGGTCCCAATGGACGTCCCGGCTGATG 68 Query 19996 CCAAGCACGTTATTAACGGGCACGTTGGAAATGGTTTTATGCCAGCCCTGC 20046 || |||| |||| ||||||||| | | ||||||||||| ||| Sbjct 67 CCGGTCACGCCGGCTACGGCCACGTTGGACAGCGACTTATGCCAGCCTTGC 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107090179460964