Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_028749.1 Length=134270 Score E Sequences producing significant alignments: (Bits) Value seq846 98.7 9e-16 >seq846 Length=203651 Score = 98.7 bits (108), Expect = 9e-16 Identities = 266/406 (66%), Gaps = 16/406 (4%) Strand=Plus/Plus Query 96699 CCACCAAATAGTCCATGCACACTTTCATCACGAATGATTAAGTTAATAATTTCACCACTT 96758 ||| |||||| ||||| | | |||||| |||||| ||||| || || |||| Sbjct 15820 CCAACAAATACACCATGTATAGATTCATCGGCAATGATCTTTTTAATGATATCGGCACTG 15879 Query 96759 GCAACCATCTTCCCTTGACCAGCCAAATACAGAGGGTAA--AAGAAACCACTATAAAATA 96816 || ||||| | ||||| || |||| || |||| | ||||| || || ||||| | Sbjct 15880 GCGACCATTTCACCTTGTCCG--CAAAGCCAAAGGGGCATAAAGAATCCGCTGTAAAACA 15937 Query 96817 GGAACGACTCTAAGAACACAGAGGCTACAATTGCCATATATAAGTCTT-----------T 96865 | || || || | | || || || | | |||| | || |||| | Sbjct 15938 GAAAAGATTCCAGCAGAACCGAAGCGCCCAAAGCCAGGAACAATTCTTCATCATTCACCT 15997 Query 96866 CTTTGTT-TCAATGTTGCGGTAATATTTGTCAATGATAGACACTTTCTTTTGTAGATATT 96924 ||| || || | | ||||||||| |||||| | | |||| || || |||| Sbjct 15998 GTTTTTTGTCCAGGGCGCGGTAATAGCGGTCAATTGTTGCTGCTTTAAACTGCAGGTATT 16057 Query 96925 TATTCTCAGCGACCCAATCAAATACATCGTCGATTTCTTCCTTTGTGGCTAATGTTGTAA 96984 | || || ||||| ||||| | || | |||||||| | |||| | ||||||| Sbjct 16058 TGTTGGCATGTACCCAGTCAAAAAGTTCATTGATTTCTTGTGTAGTGGTCACGGTTGTAA 16117 Query 96985 AAATTGTACTATAAGATTTTGCATGGATGCCTTCCATCATTCCCATAAAAGACAAGACAG 97044 |||| || ||| ||||||||||| ||| |||||||||| | ||||||||| | || | Sbjct 16118 AAATCGTGGAATAGGATTTTGCATGAATGGCTTCCATCATACACATAAAAGAAAGCACGG 16177 Query 97045 ATTTCTTAGCAAGGTCATTTATATGGTCTAAGATTTTTGGCATACC 97090 ||| || || || |||||||| | ||||| ||||| || Sbjct 16178 CTTTATTTTGCAGCGAATCAATATGGTCCAGAATTTTGGGCATTCC 16223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429469145109562