Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_028765.1 Length=142348 Score E Sequences producing significant alignments: (Bits) Value seq232 168 6e-37 >seq232 Length=384298 Score = 168 bits (186), Expect = 6e-37 Identities = 422/635 (66%), Gaps = 17/635 (3%) Strand=Plus/Plus Query 125670 CAGCAGGTCATGCAATTAGTTTTAAAGGTAGTGACACTGTACCTGTAGTAGACTTTTTAG 125729 |||| || ||| | | ||||||| ||| ||| || | || | | || || |||| Sbjct 85362 CAGCTGGACATTTATTGAGTTTTACAGGATCTGATACCATTCCGGCGATCGATTTCTTAG 85421 Query 125730 AATCTTACTACAATGCAGATGTAGAAAAAGAAATGGTTGTTGCTTCCATCCCTGCTACTG 125789 || || || || || || ||| |||||| |||| | | ||| || |||| || | Sbjct 85422 AAGAATATTATAACGCCAATTCAGACAAAGAATTGGTGGCAGGTTCAGTCGCTGCAACAG 85481 Query 125790 AGCATTCAGTTATGTGTGCAAATGGTGATTATGAAACAATGGATGAATATGAGACATACA 125849 | ||||| || ||||| |||| || | || | || | ||| || || || | || Sbjct 85482 AACATTCTGTAATGTGC----ATGG-GA--ACGACAGAAGG--TGAGTACGAAACCTTCA 85532 Query 125850 AACGTATGTTAACAGAAATTTACCCGACAGGAGTATTCTCTATTGTATCTGATACTTGGG 125909 || | | | |||||| |||| || | |||| | | ||||| || ||||||||||||| Sbjct 85533 AAAGATTAATTACAGAAGTTTATCCAAAAGGAATTGTTTCTATCGTTTCTGATACTTGGG 85592 Query 125910 ATTTTTGGGGTAATATGACTAAAACTTTACCT----AGATTAAAAGATATTATTATGGAA 125965 |||| ||| | | | ||| | |||||| ||||||||||| ||| | Sbjct 85593 ATTTATGGAA-AGTTT---TAACAGATTACCTCCCAAGATTAAAAGAAGATATCGTTTCT 85648 Query 125966 CGTGACGGTAAAGTAGTAATCAGACCTGATAGTGGAGACCCTGTTAAGATTATTTGTGGA 126025 | || || ||||| || || | ||||| ||||| || || || ||||| || ||| Sbjct 85649 AGAGAAGGAAAAGTGGTTATTCGTCCTGACAGTGGTGATCCAATTTTAATTATCTGCGGA 85708 Query 126026 GACCCTGACGCAGATACTGAGTATGAACGTAAAGGTGCTGTAGAGGTGCTTTGGGATACT 126085 | ||||||| | | || || | || ||||| | | | || ||||||||||| | Sbjct 85709 AATCCTGACGGAAAAACAGAACAAGAGAAAAAAGGAGTTATCGAATTGCTTTGGGATGTT 85768 Query 126086 TTTGGAGGTACTGAAACTGAAAAAGGATATAAAGTACTAGATGAGCATGTAGGATTAATT 126145 ||||| || || || || ||||| | |||| | | | | || | ||| |||| Sbjct 85769 TTTGGTGGAACGACAAACGATAAAGGTTTCAAAGAATTGGTTCCACAAATCGGAGCAATT 85828 Query 126146 TATGGGGACTCTATTAACTATGAGCGTGCACATCAAATTTGTGAAGGATTAAAAGAAAAA 126205 ||||| || ||||| | | | ||| | |||| || || ||||||||| ||| Sbjct 85829 TATGGCGATAGTATTACCGTAGCAAGAGCAACTGAAATCTGCGAGAGATTAAAAGCGAAA 85888 Query 126206 GGTTTTGCAAGTATTAACGTTGTATTAGGTGTAGGTAGTTTCTCTTACCAATTTAATACT 126265 |||||||| || ||||| || ||||| | || |||| | || |||| ||||| Sbjct 85889 GGTTTTGCTTCTACAAACGTGGTTTTAGGAATTGGATCTTTCACGTATCAATACAATACA 85948 Query 126266 CGTGATACTCATGGCTTTGCAATCAAAGCAACCTA 126300 ||||||||| ||| |||||||| |||||||| || Sbjct 85949 CGTGATACTTTTGGTTTTGCAATGAAAGCAACTTA 85983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 455309425373760