Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_028936.1 Length=59052 Score E Sequences producing significant alignments: (Bits) Value seq10595 114 5e-21 >seq10595 Length=412 Score = 114 bits (126), Expect = 5e-21 Identities = 173/241 (72%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 53128 GTCGACCACCTTGACCGTGTGTGGTTGTTCCTGCACTCCGGTTCGCGTGGTGTAGGCAAC 53187 ||||| | || || || || ||| ||||||||||||| || ||||| || || |||||| Sbjct 405 GTCGATGAGCTCGATCGGGTCTGGCTGTTCCTGCACTCGGGCTCGCGAGGCGTCGGCAAC 346 Query 53188 AAGATCGCGCAGCGGCATATCGCTGCGGCGCAG-GGCTACTGCCACAACAACGGCCTGCA 53246 |||||||| || || ||||| | || ||| |||| | || || | | Sbjct 345 AAGATCGCCGGGCACCACATCGCCGTCGCCCAGCGGCTGGCGAGGCAGTGGTGGATCG-A 287 Query 53247 GGTGCCTCACCCTGATCTGGCGTATCTCGTCGAGGGCACGCCCGAGTTCGACTCG-TACA 53305 | || |||| || ||||| || || ||||||||||| || |||||| || || |||| Sbjct 286 CCTTCCCGACCCCGACCTGGCATACCTGGTCGAGGGCACACCGGAGTTC-ACCCGCTACA 228 Query 53306 TCGTCGAGTTGCGGTGGGCGCAGCGGTTCGCGTACCTGAACCGTGCCGAGATGCTGGATC 53365 || ||| |||||||||| |||| |||||| |||||||| | |||||| |||||| Sbjct 227 TCCGGGAGCTGCGGTGGGCCCAGCACTTCGCGCTGCTGAACCGGGAGGAGATGATGGATC 168 Query 53366 G 53366 | Sbjct 167 G 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188814790436776