Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_028945.1 Length=206713 Score E Sequences producing significant alignments: (Bits) Value seq1087 93.3 6e-14 seq76 84.2 3e-11 >seq1087 Length=202632 Score = 93.3 bits (102), Expect = 6e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 181971 AGTTTCTTGGTGGTCACGGCAGGAAAGCCCTTGGACAGGTCGAAACGTATCTGGCGACCA 182030 ||||||||||| |||| ||||||||| ||| ||||| ||||| || |||||| || Sbjct 83809 AGTTTCTTGGTCGTCAGGGCAGGAAAACCCGCCGACAGATCGAATCGCATCTGGTAGCCG 83868 Query 182031 AATACGGACCTTGTGCCAGTTCCGGTACGATCATCGGCATCGACGCCGTTTTCCAGCAC 182089 || ||||| | |||||| || |||||||| || || ||||||||| | || ||||| Sbjct 83869 AAAACGGAACGTGTGCCTGTCCCGGTACGGTCGCCGCGGTCGACGCCGGTATCGAGCAC 83927 >seq76 Length=330973 Score = 84.2 bits (92), Expect = 3e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 96755 TGCGGGGTAGTAGCAGTGGTTAGCTCGTCTGCCTCATAAGCAGAAGGTCATCAGTTCGAA 96814 |||||||| | |||||| | ||||||||| | ||||||| | ||||||||||||||||| Sbjct 104299 TGCGGGGTGG-AGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATCAGTTCGAG 104241 Query 96815 TCTGATCCCCGCAACC 96830 |||| ||||||| ||| Sbjct 104240 TCTGGTCCCCGCTACC 104225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 661242972076560