Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq4866 87.8 6e-13 seq446 86.0 2e-12 >seq4866 Length=358 Score = 87.8 bits (96), Expect = 6e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| || |||||| ||||||||||| ||||||||||| |||||||||||||| |||| Sbjct 87 CGGGGTGGAGCAGTTCGGTAGCTCGCCGGGCTCATAACCCGGAGGTCGCAGGTTCAAATC 28 Query 21210 CTGTCTCCGCAAC 21222 ||||| ||||||| Sbjct 27 CTGTCCCCGCAAC 15 >seq446 Length=116643 Score = 86.0 bits (94), Expect = 2e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| || |||||||||||||||||| ||||||||||| ||||| ||||||| |||| Sbjct 5759 CGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCACAGGTTCAAATC 5818 Query 21210 CTGTCTCCGCAACCA 21224 ||||| ||||||||| Sbjct 5819 CTGTCCCCGCAACCA 5833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162498972980876