Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_029083.1 Length=93464 Score E Sequences producing significant alignments: (Bits) Value seq232 86.0 4e-12 >seq232 Length=384298 Score = 86.0 bits (94), Expect = 4e-12 Identities = 191/287 (67%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 7074 GGGTCTTTGAAGATTGCAATGCCTTCTCCATTCACCTCGGTGTAGGTGGCCTTCACTGCG 7133 || |||||||||||||| | || || || || || || ||| || || |||| ||| Sbjct 86025 GGATCTTTGAAGATTGCTCTTCCCTCACCGTTTACTTCTCCGTAAGTTGCTTTCATTGCA 85966 Query 7134 AACCCGAAGGTGTCTCGGGTATTGCACTGATAGGTGTAACTCCCAACTCCGAAGACCACG 7193 || || || || || || |||||| | ||||| ||| || |||| ||| || |||||| Sbjct 85965 AAACCAAAAGTATCACGTGTATTGTATTGATACGTGAAAGATCCAATTCCTAAAACCACG 85906 Query 7194 TTCAAGGATGCGAAACCTTTCTCCTTGAGCCGCTCCAAGATTTTGGCTGCCCGACGTGTG 7253 || || || ||||||||| | || | | ||| |||||| | ||| | | | Sbjct 85905 TTTGTAGAAGCAAAACCTTTCGCTTTTAATCTCTCGCAGATTTCAGTTGCTCTTGCTACG 85846 Query 7254 GTGATCGAATCCCCATAGATCAAACCGATATGAGAATCCAGCATCTTATAACCAGCTTCG 7313 || || ||| ||||| || ||||| || | | ||| || |||| ||| Sbjct 85845 GTAATACTATCGCCATAAATTGCTCCGATTTGTGGAACCAATTCTTTGAAACCTTTATCG 85786 Query 7314 TTTACAGTACCACCGAAGGTTTCCCAAAGAACTTGGATAGCACCTTT 7360 ||| || ||||| || |||||||| | || |||| | ||||| Sbjct 85785 TTTGTCGTTCCACCAAAAACATCCCAAAGCAATTCGATAACTCCTTT 85739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 298911241679350