Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq444 87.8 1e-12 >seq444 Length=38654 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/233 (68%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 ||||||||| ||||| |||||||| || || || |||||| | || ||||| | | Sbjct 4816 AATGCAAATCTTTGTTAAAACTCTGACAGGCAAGACTATTACCTTGGAGGTCGAGGGTTC 4875 Query 27849 CGACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATG 27903 ||| ||| |||| ||||| || || ||||| || || |||| Sbjct 4876 CGA-----TACTATCGAGAACGTCAAGACCAAGATCCAAGACAAGGAGGGAATTCCACCT 4930 Query 27904 GAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGAT 27963 || || ||||| | || |||||||| || ||| | || || | || | | |||||| Sbjct 4931 GACCAACAACGTCTCATCTTTGCCGGCAAGCAACTTGAGGATGGTCGTACTCTCTCCGAT 4990 Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||||||| ||| |||| | || |||||| | ||| | ||||| || Sbjct 4991 TACAACATCCAAAAGGAGTCCACTCTTCACTTGGTTCTCCGTCTCCGTGGTGG 5043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355804361289114