Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_030940.1 Length=32637 Score E Sequences producing significant alignments: (Bits) Value seq9696 104 5e-18 seq1310 86.0 1e-12 >seq9696 Length=1100 Score = 104 bits (114), Expect = 5e-18 Identities = 71/79 (90%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 2852 GGGGGCCTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCG 2911 |||||||||||||||| |||||||||||||||||||||||||||||||| | |||||| Sbjct 529 GGGGGCCTATAGCTCAA-CGGTTAGAGCAGAGGACTCATAATCCTTTGGTTGAAGGTTCG 471 Query 2912 AGTCCGTGTGGGCCCACCA 2930 | ||| | ||||||||||| Sbjct 470 AATCCTTCTGGGCCCACCA 452 >seq1310 Length=146132 Score = 86.0 bits (94), Expect = 1e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2854 GGGCCTATAGCTCAGTCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCCACGGTTCGAG 2913 |||||||||||||||| |||||||| ||| ||||||||||| ||||||| |||||||| Sbjct 7427 GGGCCTATAGCTCAGTTGGTTAGAGTAGAAGACTCATAATCTTTTGGTCGCTGGTTCGAG 7368 Query 2914 TCCGTGTGGGCCCAC 2928 || ||||||||| Sbjct 7367 CCCAGCTGGGCCCAC 7353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104300222886916