Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_031034.1 Length=161140 Score E Sequences producing significant alignments: (Bits) Value seq232 111 2e-19 >seq232 Length=384298 Score = 111 bits (122), Expect = 2e-19 Identities = 214/310 (69%), Gaps = 8/310 (3%) Strand=Plus/Minus Query 24549 ATCAGATACGATACTTACAATACCAGTAGGGTATACTTCTGTAATTAATCGTTTGAATGT 24608 |||||| |||||| ||||| || | || || |||||||||||||||| |||||| || Sbjct 85585 ATCAGAAACGATAGAAACAATTCCTTTTGGATAAACTTCTGTAATTAATCTTTTGAAGGT 85526 Query 24609 TTCGTACTCATCTAAGTCTTCACCTGCTGATGCGCACATAACACTATGTTCAGTCGCGCT 24668 |||||||||| || || | | | | || |||||| ||| |||||| || || Sbjct 85525 TTCGTACTCACCT---TC-TGTCGTTCCCAT--GCACATTACAGAATGTTCTGTTGCAGC 85472 Query 24669 TACAGAACCTGCTACTAATTCTGTTTCAACATTAGCTTTATAGTATTTTTCTAAATACAC 24728 || |||||||| || |||||| | || ||| || ||||| |||| |||||| | | Sbjct 85471 GACTGAACCTGCCACCAATTCTTTGTCTGAATTGGCGTTATAATATTCTTCTAAGAAATC 85412 Query 24729 GATAGCTGGAATGCTGTCAGTACCAACGAATGATAATAAGTGACCAGAACCAGATTTCTC 24788 ||| || |||||| | |||| || || ||||| || |||| |||| || Sbjct 85411 GATCGCCGGAATGGTATCAGATCCTGTAAAACTCAATAAATGTCCAGCTGCAGAAGTCAG 85352 Query 24789 TGTAGTCTGTAAT-GAACCCATACCGCGCATTGAGAAATCATGTAATAACCATTTAACTA 24847 | | || ||| |||||| || | |||||||||||| ||| ||| | || | Sbjct 85351 CGCTG-CTTCAATACCACCCATTCCTCTCATTGAGAAATCGTGTGCCTGCCAGTCTACAA 85293 Query 24848 GTTCTGGAAC 24857 ||||||||| Sbjct 85292 ATTCTGGAAC 85283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515433766392000