Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq10414 82.4 8e-11 seq16 82.4 8e-11 >seq10414 Length=692 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 1046 GCGGCAGGATTTGAACCTGCGACATTCTGCTCCCAAAGCAGACGCTCTACCAAACTGAGC 1105 ||| ||||| ||||||||||||| | | ||||||||||| | |||||||||||||||||| Sbjct 432 GCGACAGGAGTTGAACCTGCGACCTCCCGCTCCCAAAGCGGGCGCTCTACCAAACTGAGC 491 Query 1106 TAC 1108 ||| Sbjct 492 TAC 494 >seq16 Length=320404 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 16 CAGAAGGATTCTAACCTTCAACCTACGGATTAGAAGTCCGTTGCTCTATACAATTGAGCT 75 ||||||||||| ||||||| ||||||| ||||||||| ||||||||||| || |||||| Sbjct 239914 CAGAAGGATTCGAACCTTCGACCTACGCATTAGAAGTGCGTTGCTCTATCCAGCTGAGCT 239855 Query 76 ATG 78 ||| Sbjct 239854 ATG 239852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546244611645600