Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq6167 107 5e-19 >seq6167 Length=616 Score = 107 bits (118), Expect = 5e-19 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 26970 TACGGGTTCGCAGACCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAG 27029 ||||||| || || || || ||| | |||| ||| |||||||| |||||||||| Sbjct 453 TACGGGTACGGAGTTGCCCCTCGATGTAGACCTGCGCGCCCTTGCGCAGATATTCACCAG 394 Query 27030 CGATTTCCGCCAGCTTGCCGAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTT 27089 | | |||||| ||||||||||| | || ||||||||||||||||||||||| | Sbjct 393 CCACTTCCGCGAGCTTGCCGAACAGCACCACGCGGTGCCATTCCGTCTGCTCCCGCATCT 334 Query 27090 CGCCTGTGGCCTTATCTTTCCACTTTTCGGTTGTGGCAATGCTG-AGATTGGCAACTGCG 27148 | || || || || ||| |||| | ||||| | ||| || || || |||||| Sbjct 333 CCCCCGTCTGTTTGTCACGCCAGCTTTCTGACGTGGCGA-CCTGCAGGTTTGCCACTGCG 275 Query 27149 CCACCTGACGGCATGTAGCGCACTTCTGGATCGTTGCC 27186 || || || ||||| || ||||| ||||| ||||| Sbjct 274 CCCCCGTTGGGGATGTAACGGACTTCCGGATCATTGCC 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133994703349920