Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq93 93.3 4e-14 seq10414 82.4 8e-11 seq2598 82.4 8e-11 >seq93 Length=584700 Score = 93.3 bits (102), Expect = 4e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 100842 ATGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGT 100901 ||||||| |||||||| ||||||||||| ||||||||||||| ||||||||||| ||| Sbjct 584427 ATGCGAAAATAGCTCAGTTGGTAGAGCGCGACCTTGCCAAGGTCGAGGTCGCGGGTTCGA 584486 Query 100902 AACCCGTTCTTCGCTC 100917 |||||| ||||||| Sbjct 584487 GCCCCGTTTTTCGCTC 584502 >seq10414 Length=692 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 95712 CCACGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTC 95771 || ||||| |||| ||||||||| ||||||| | ||||||| | || ||||||||||| Sbjct 503 CCCCGGGGCGTAGCTCAGTTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTC 444 Query 95772 GAATCCTGTCACCCCGACTCAGC 95794 | ||||||| ||||||| |||| Sbjct 443 AACTCCTGTCGCCCCGACACAGC 421 >seq2598 Length=28017 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 100839 TCGATGCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGAT 100898 || ||||||| ||||||||| ||||||||| | ||||||||||||| | ||||||| | | Sbjct 12916 TCAATGCGAAAGTAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTT 12975 Query 100899 CGTAACCCGTTCTTCGCTCT 100918 || | | ||| |||||||| Sbjct 12976 CGAATCTCGTCTTTCGCTCT 12995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514937849360400