Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq8001 96.9 1e-15 >seq8001 Length=883 Score = 96.9 bits (106), Expect = 1e-15 Identities = 283/431 (66%), Gaps = 14/431 (3%) Strand=Plus/Plus Query 10019 AAACTGAGCGTGACCTTTGCCCTGGACTGCTGTGATCGCGAAGCCATCGGCTGGGTGGCC 10078 |||||| | || || || ||||||||||| || ||||| |||||||| | ||||| || Sbjct 115 AAACTGCGTGTTACGTTCGCCCTGGACTGTTGCGATCGTGAAGCCATAGACTGGGCCGCA 174 Query 10079 AGCCCGACCGGCTAC-----AGCGGCGATGACATACGCGACTTGATGCTGGAAAGCG-TG 10132 ||| || || ||| |||| | || | || | ||| | | | ||| | Sbjct 175 AGCACGGGAGGTTACGATAAAGCGACAGTG-----CAGGATGTCATGTTAGGA-GCGATA 228 Query 10133 GAGAAGCGTTTTGGCGACCTACTGCCG-ACCACACCGGTGCAATGGCTAAGCGATAACGG 10191 || || || |||||||| | | ||| | || || | || ||||| | |||||||| Sbjct 229 GAAAAACGCTTTGGCGATAAAGTACCGGAACAGTCCA-TCCAGTGGCTGACAGATAACGG 287 Query 10192 TTCGGCCTACATCGCTGAACAGACGCGCCTGTTTGCTCGACAGATTGGCCTACAGCCAGT 10251 ||| || || | || | | || || | ||| || || || | || |||| Sbjct 288 TTCAGCGTATAGAGCGCATGAAACACGGCAGTTCGCCAGAGAGTTGAATCTGGAGCCCTG 347 Query 10252 GACCACGCCGGTACGCAGCCCGCAGAGCAACGGCATGGCAGAGAGCTTCGTTAAGACAAT 10311 || ||| | | |||| || ||||| || || |||||||| || ||||| || || || Sbjct 348 CACAACGGCAATCAGCAGTCCTCAGAGTAATGGAATGGCAGAAAGGTTCGTGAAAACGAT 407 Query 10312 CAAGCGCGACTACGTGGCGCACATGCCCAAGCCGGATCGAGAGACAGCCTTGCGCAACCT 10371 ||| |||||| | ||| |||||| || ||| || | || || |||| || || Sbjct 408 GAAGGAAGACTACATCGCGTTCATGCCGAAACCGAATGTAAGAACGGCATTGCATAATCT 467 Query 10372 GACGATTGCCTTCGAGCATTACAACGAGCAGCATCCGCACAGCGCCTTGAAATACCGCTC 10431 | | || |||| |||||||| || | ||||||||||| || || || ||||| Sbjct 468 TGCAGTGGCGATCGAACATTACAATGAAAACCATCCGCACAGTGCGCTGGGTTATCGCTC 527 Query 10432 GCCGAGGGAAT 10442 ||| | |||| Sbjct 528 TCCGCGAGAAT 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138342812276676