Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_031103.1 Length=165772 Score E Sequences producing significant alignments: (Bits) Value seq93 89.7 5e-13 >seq93 Length=584700 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 140634 ATTTGTGCTTCCTGATAAAAACCAAAGCAGCTCAGCAATGCAAGCTTTCCAGGCGAGCTT 140693 |||||| |||| |||||||||||||| || ||| | ||| | ||| || Sbjct 272758 ATTTGTATCTCCTTTTAAAAACCAAAGCAATTCGTAGATGATCGATTTTAAATGGAGTTT 272817 Query 140694 CTTGGTTGTTACCGCAGGAAAACCTTTAGTTAAATCCCAACGTAATTTAGTACCGAACAA 140753 || || || ||| || ||||||| | ||||||| |||| | | | ||| | || || Sbjct 272818 TTTTGTCGTAACCATTGGGAAACCTTCACTTAAATCAAAACGCA-TCTGGTAGCCAAAAA 272876 Query 140754 AGCAATT-GTTCCTGTGCCTGTTCGATCATCGGTTTCATAGCCATTTTCAAAAATATCTT 140812 | || |||||||| |||||||| ||| | ||| || ||| ||||| |||| | || Sbjct 272877 CACTTTTCGTTCCTGTTCCTGTTCGGTCACCTTTTTGATTGCCGTTTTCTAAAACGTATT 272936 Query 140813 TAATTAAATCTTGGTATTGTTTCATT 140838 | | ||||||| ||||||||||||| Sbjct 272937 TTACTAAATCTAAGTATTGTTTCATT 272962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530253686975040