Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq10414 98.7 1e-15 seq3078 82.4 9e-11 >seq10414 Length=692 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 167483 CGGGGCGTAGCTCAGTTTGGTAGAGCACTCGCTTTGGGAGCGAGTGGCCGTAGGTTCAAA 167542 |||||||||||||||||||||||||| | ||||||||||||| | || || |||||||| Sbjct 500 CGGGGCGTAGCTCAGTTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAC 441 Query 167543 TCCTATCGCCCCGA 167556 |||| ||||||||| Sbjct 440 TCCTGTCGCCCCGA 427 >seq3078 Length=957 Score = 82.4 bits (90), Expect = 9e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 165862 GCTTAACTCAGCGGTAGAGTGTCTCCTTTACACGGAGGGTGTCGGCGGTTCGAATCCGTC 165921 ||||| ||||||||||||| ||||||||||||||||| | ||||| |||||||| || || Sbjct 100 GCTTAGCTCAGCGGTAGAGCGTCTCCTTTACACGGAGAGGGTCGGGGGTTCGAAACCCTC 41 Query 165922 AGC 165924 ||| Sbjct 40 AGC 38 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621966343173840