Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_031924.1 Length=47564 Score E Sequences producing significant alignments: (Bits) Value seq2271 168 2e-37 >seq2271 Length=37941 Score = 168 bits (186), Expect = 2e-37 Identities = 205/277 (74%), Gaps = 2/277 (1%) Strand=Plus/Plus Query 9192 GACGCACAGCAAAGGATTGATGCTGCGCGCAATGATGCCGTTAATGCTGCTGCTAAGTCT 9251 || || ||||| ||||| || |||||||||||||| || ||||||| ||| || Sbjct 7644 GAAGCGCAGCAGAGGATCGACCAGGCGCGCAATGATGCTCTTGATGCTGCCGCTCGCGCT 7703 Query 9252 GGCAGGTTGCAGCAACAACTCGCAAATATCCGCAAGCAGCTT-GTCGGATATTCCACCTC 9310 ||| ||||||||||||| |||| ||||| ||||||| | | | ||| | || | Sbjct 7704 GGCCGGTTGCAGCAACAGCTCGTTGCCATCCGTGAGCAGCTCAGGCAG-TATAACGCCAC 7762 Query 9311 TGAGTCCATTGGCAACCCAGCCGCAGATGCCGGAGTTTTGCTTGGAGACGTGCTCAGCAA 9370 | || ||| |||||||||| ||||||||||||||| |||||||||||||| Sbjct 7763 TATCGGCACTGGGGCGTCAGCCGCAGACACCGGAGTTTTGCTTGCCGACGTGCTCAGCAA 7822 Query 9371 ATCTGTCGAAAGAAATAGACAACTGGCAGATTACGCTGACAGGGCAAGAGAAGCAGGACT 9430 |||| |||| |||| ||||||||||||| ||||||||| |||| ||||| |||| Sbjct 7823 ATCTCTCGAGCGAAACCGACAACTGGCAGAGTACGCTGACCGGGCCGCCGAAGCCGGACG 7882 Query 9431 AGCGTGCCAGAAGCAATACGAATCACTGACAAGGAGA 9467 || || | ||||| ||||| || |||||| || || Sbjct 7883 AGTCTGTGAAAAGCAGTACGATTCGCTGACACGGTGA 7919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152059032268584