Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq126 93.3 5e-14 seq5 91.5 2e-13 >seq126 Length=461790 Score = 93.3 bits (102), Expect = 5e-14 Identities = 68/77 (88%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 165488 GGGAGATTAGCTCAGC-GGT--AGAGCACCTCGTTTACACCGAGATTGTCGGGGGTTCGA 165544 ||| |||||||||||| ||| |||||||||||||||||||||| ||||||||||||| Sbjct 441733 GGGCGATTAGCTCAGCTGGTTCAGAGCACCTCGTTTACACCGAGGGGGTCGGGGGTTCGA 441792 Query 165545 TCCCCTCATCTCCCACT 165561 ||||||||| |||||| Sbjct 441793 ACCCCTCATCGCCCACT 441809 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 165488 GGGAGATTAGCTCAGC-GGT--AGAGCACCTCGTTTACACCGAGATTGTCGGGGGTTCGA 165544 ||| |||||||||||| ||| |||||||||||||||||||||| ||||||||||||| Sbjct 441963 GGGCGATTAGCTCAGCTGGTTCAGAGCACCTCGTTTACACCGAGGGGGTCGGGGGTTCGA 442022 Query 165545 TCCCCTCATCTCCCAC 165560 ||||||||| ||||| Sbjct 442023 ACCCCTCATCGCCCAC 442038 >seq5 Length=514667 Score = 91.5 bits (100), Expect = 2e-13 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 165488 GGGAGATTAGCTCAGC-GGT--AGAGCACCTCGTTTACACCGAGATTGTCGGGGGTTCGA 165544 ||| |||||||||||| ||| |||||||||||||||||||||| ||||||||||||| Sbjct 79456 GGGCGATTAGCTCAGCTGGTTCAGAGCACCTCGTTTACACCGAGGGGGTCGGGGGTTCGA 79515 Query 165545 TCCCCTCATCTCCCAC 165560 ||||||||| ||||| Sbjct 79516 ACCCCTCATCGCCCAC 79531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592099340012640