Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq232 194 2e-44 seq2141 122 9e-23 seq2491 114 1e-20 >seq232 Length=384298 Score = 194 bits (214), Expect = 2e-44 Identities = 624/959 (65%), Gaps = 51/959 (5%) Strand=Plus/Minus Query 23161 TAAAAATCTTCATCTAAAGTGAATTTCACTGCTT---TATCACTATTCATAACACCCATT 23217 ||||||||| |||| || | | ||| || | | ||| | ||||| ||||| Sbjct 339550 TAAAAATCTGCATCGAATGAAATTTTTTGAGCATCGCTGTCATTGTTCATCACACCTGAC 339491 Query 23218 TTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTT 23277 |||||||| || |||||||| |||| || ||||| || || |||| | ||| || | Sbjct 339490 TTTTGATACTCTGCAACACGTTTTTCAAAGAAATTAGTTTTTCCCTGAAGTGAAATCATA 339431 Query 23278 TCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAATTCCTTTAAA 23337 ||||| ||||| |||||||| | | || ||| | ||| ||||| ||| Sbjct 339430 TCCATGAAATCGAATGGATTTGCTGATCCGTAAACACGCTCACAGCCCAATTCTACTAAT 339371 Query 23338 AGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGT 23397 | ||||| || || || || | ||| || ||| | | || ||| ||||| |||| Sbjct 339370 AATCTATCGGCAACGAACTCTAAATACTGTGTCATAAGACCAGCGTTCATACCAATTAAA 339311 Query 23398 TTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATT 23457 |||| |||| | || | ||| || |||| || | |||||| ||| ||| Sbjct 339310 CTTACCGGAAGAGATTCTGTGATAAATTGTCTTTCGATATCTAAAGCATCGACAATAATT 339251 Query 23458 TGAACAATAACTTCT-TCACTAGGTGGATATTTTA---AATACTTAAA---CAA-TAAAC 23509 | | ||| |||| || | || | |||| ||| | | || | ||| Sbjct 339250 T---CTTTAA-TTCTATCTTTTGGCACTTTGTTTACCAAATGGTGATTGTGCAGGTGAAC 339195 Query 23510 ATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATC 23569 |||||||||||||||| ||||| || | | ||||||||||||||| |||||||| | Sbjct 339194 C-GCAAAATCACAATGTACACCTTCGTCACGAGAAATCAATTCATTAGAGAATGTTAAAC 339136 Query 23570 CTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAA 23629 |||||||||| || |||||||| | |||| | |||| | || | ||| || || || | Sbjct 339135 CTGGCATTAAACCACGTTTTTTCAACCAATAAATTGAACAGAAAGCTCCCGAGAAAAAGA 339076 Query 23630 TACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA- 23688 | || ||||| || ||||| || | || | | | |||||| ||||||| Sbjct 339075 TTCCTTCAACTGCAGCAAAAGCAATTAGTCTTTCAGCAAATG---------AATCAGATT 339025 Query 23689 --ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTT 23746 ||||||||| | ||| | || || ||| || ||||| || ||| Sbjct 339024 CGATCCATTTTAAAGCCCATTCTGCTTT----TTT-----CTTAATTGCAGGAAAAACTT 338974 Query 23747 TTAAGAGA--AAA-------GTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTA 23797 ||| | ||| | ||||||| | | ||| ||| ||| |||||||||| || Sbjct 338973 CTAAAGCATTAAACAACTCTGATTTTTCTGCTTCGTCTTTTACATACGTATCAATTAATA 338914 Query 23798 AACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAG 23857 || ||| | ||| |||||||| || || ||||| || |||||||| | | | Sbjct 338913 AAGAATAAGTCTCACTGTGAATATTCTCCATCATGATCTGGAAACCATAAAAGAACTTTG 338854 Query 23858 CTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCAT 23917 |||| | ||||||| || |||| ||| | | ||| | ||||||||| || || || | Sbjct 338853 CTTCGGCGTATTGAACCTCGTTAACAAAATTCTCAGCCAGATTTTCGTTTACGATTCCGT 338794 Query 23918 CACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATT 23977 | ||||||||| || || | || || ||| || |||| | ||| || || ||| | Sbjct 338793 CTGAAGCAGCAAAAAATGCTAAAATATGTTTAATGAAATAACGTTCGTC-GTCATTAAGT 338735 Query 23978 TT----TTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTT 24033 || |||||||| | | ||| | |||||| | ||| || | ||||| ||||| Sbjct 338734 TTATTATTCCAATCTGTTAAATCCTGATGTAAATCGATTTCTTCGGCAGTCCAGAAACTA 338675 Query 24034 GCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAA 24092 || |||||| | ||||||||||| ||||| || ||||| || ||||| Sbjct 338674 GCTTCCATTTTTTTATACCATTCCCAAATATCATGATGTTTGATAGGAAAAATAACGAA 338616 >seq2141 Length=1138 Score = 122 bits (134), Expect = 9e-23 Identities = 135/180 (75%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 23786 TATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCAT 23845 ||| ||||| | ||||| | || ||||||||||||||||| ||||| || || |||| Sbjct 57 TATAAATTACATACCTATAAGTCTCTGAATGAATATTTTCAATGGCAATTTGGAAACCAT 116 Query 23846 AAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGT 23905 | |||||||||||||||| | ||| || || | ||||| | || || || || | Sbjct 117 AGAAACATCTAGCTTCAGGGATTTGGACCTCTGACATGAATCTGGTGGCCAAGTTCTCAT 176 Query 23906 TAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCAT 23965 | || ||||||||||| |||||||||||||| | || | | | ||||| || | ||||| Sbjct 177 TGACGATACCATCACTGGCAGCAAAGAAAGCCAAGACGTTTGTAATAAAGTGACGTTCAT 236 >seq2491 Length=10632 Score = 114 bits (126), Expect = 1e-20 Identities = 528/832 (63%), Gaps = 12/832 (1%) Strand=Plus/Minus Query 23208 AACACCCA--TTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCT 23265 ||||||| |||||||||| || || |||||| | || || ||||| || || || | Sbjct 4875 AACACCCCGCTTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGC 4816 Query 23266 AATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGAT 23325 | || || | |||||||||||||| ||||| | | || ||||| || | Sbjct 4815 AGGGAGATCATCTCCATAAAATCAAACGGATTGGTGGCATGATATATTTTGGTATAACCC 4756 Query 23326 AATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTT 23385 | ||||| | || ||||| ||||| |||||||| || |||||| | || Sbjct 4755 AGTTCCTGCAGCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTC 4696 Query 23386 ATACCTATTAGTTTTACTGGAATCGCATCATATAAGAA-TAGTTTTTCAATGGAAACAGC 23444 || || || || || || | ||||| | ||| || | ||||| || || || Sbjct 4695 ATCCCGATCAGGGCAACCGGCAAGGCATC-TGTAATAAATTCCTTTTCGATTTCTACCGC 4637 Query 23445 ATCTTTAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTAAACAA 23504 || || ||| | || ||||| | || || || ||| | ||| | | Sbjct 4636 GTCGCGGATAATTCCATGAACGACTTCCTGGCTCAGTTTATTTTTGAGCATTTTATAAAG 4577 Query 23505 TAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGT 23564 | || ||||| |||||||| | || ||||| || |||||| |||||| ||| || Sbjct 4576 CAGGCAGGCAAATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGT 4517 Query 23565 TAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA-A 23623 || |||||||| | |||| |||||| | ||| || || | | || | | ||| | | Sbjct 4516 TAGCCCTGGCATCAGGCCTCTTTTTTTCAACCAGAAGATCGAA-CAGAAGCTCCCGCTGA 4458 Query 23624 AGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAAT 23683 ||||||| || || || || || || ||||| | |||| |||| || | | | Sbjct 4457 AGAAAATGCCTTCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAAATTTCCGCCCTCA- 4399 Query 23684 CAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTG 23743 ||||| || ||| | || || |||||||| || || || | | Sbjct 4398 -----ATCCAGCGCAATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGG 4344 Query 23744 CTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTAT 23803 | | || || |||||||||| |||| | ||||| ||||| || || | || Sbjct 4343 CATGGAACAGCCTGTCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCAT 4284 Query 23804 ACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAG 23863 | ||||||| || || ||||| || ||||| || ||||||||||| | ||||| | Sbjct 4283 AGGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGG 4224 Query 23864 ACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAG 23923 | || || || | | || | || | ||||| || ||||| || ||||| | Sbjct 4223 GAAGCTGTACTTCGCTCATGAAGTTCACTGCAAGGTTTTCATTTACAATGCCGTCACTTG 4164 Query 23924 CAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCC 23983 ||||||| |||||||| | || || ||||| | || | || ||| || | || Sbjct 4163 CAGCAAAAAAAGCAAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAGTTGTCCC 4104 Query 23984 AATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGC 24035 | | || || | || | |||| ||| ||| | ||||| |||||||| Sbjct 4103 AGTGCTTCTGGTCATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGC 4052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521400768094800