Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20deminutivum_20[genbank_20GCA_5F900092275.1_202017- 01-02] 13,382 sequences; 45,801,537 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1158 122 6e-23 seq444 114 9e-21 seq60 95.1 9e-15 >seq1158 Length=25781 Score = 122 bits (134), Expect = 6e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| |||||| || ||||||||| ||||||||||||| ||| ||| | || || Sbjct 9270 CACCAAGTGAAGGGTTGACTCCTTTTGAATGTTGTAATCGGAGAGAGTGCGACCATCCTC 9329 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || ||||| ||||| ||||| | ||| || ||||| | || | ||| ||||| || Sbjct 9330 GAGTTGCTTGCCGGCGAAGATGAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTTG 9389 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | |||| | ||||| |||| || ||||||| ||||| |||| Sbjct 9390 AATCTTGGTCTT-GACGTTCTCGATGGTATCGGAACCCTCGACCTCCAAGGTAATTGTCT 9448 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||| ||||| || ||||| Sbjct 9449 TACCAGTGAGGGTCTTGACGAAAATCTGCAT 9479 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| |||||||||||||||||| |||| || ||| | || || Sbjct 9727 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTGCGACCATCCTCA 9786 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || |||||||| | ||| || || || | || | ||| ||||| || Sbjct 9787 AGTTGCTTACCAGCAAAGATGAGACGTTGTTGGTCAGGTGGGATACCCTCCTTATCTTGG 9846 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | |||| | ||||| |||| || ||||||| || || ||||| Sbjct 9847 ATCTTGGTCTT-GACGTTCTCGATGGTATCGGAACCCTCAACCTCCAAGGTGATGGTCTT 9905 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || ||||| || |||||||||||| Sbjct 9906 GCCAGTCAGTGTCTTTACAAAGATTTGCATG 9936 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| ||||||||| || ||||| |||| ||| || | || || Sbjct 9499 ACGAGATGGAGGGTGGACTCCTTTTGAATATTGTAGTCGGAGAGAGTACGACCATCCTCG 9558 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||||||||| || || || | || | ||| ||||| || Sbjct 9559 AGCTGCTTACCAGCGAAGATCAAACGTTGTTGGTCAGGTGGAATACCCTCCTTGTCTTGA 9618 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | |||| | |||||||| | || ||||| | || || ||||| Sbjct 9619 ATCTTGGTCTT-GACGTTCTCGATGGTGTCAGAACCCTCAACCTCGAGAGTGATGGTCTT 9677 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| || || |||||||| Sbjct 9678 ACCGGTGAGGGTCTTAACAAAAATTTGCAT 9707 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| |||||||||||||||||| |||| || || |||| || Sbjct 9043 ACGAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTACGACCGTCCTCA 9102 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || |||||||| | ||| || ||||| | || | ||| ||||| || Sbjct 9103 AGTTGCTTACCAGCAAAGATGAGACGTTGTTGATCGGGTGGGATACCCTCCTTGTCTTGA 9162 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | |||| | ||||| || | || ||||| | || || ||||| Sbjct 9163 ATCTTGGTCTT-GACGTTCTCGATGGTATCAGAACCCTCAACCTCAAGGGTGATGGTCTT 9221 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | |||||| || ||||||||||| Sbjct 9222 ACCAGTCAAGGTCTTGACAAAGATTTGCAT 9251 >seq444 Length=38654 Score = 114 bits (126), Expect = 9e-21 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| ||||||||||||||||||||||| ||| || | || || Sbjct 5481 ACGAGATGGAGGGTGGACTCCTTTTGGATGTTGTAATCGGAGAGAGTACGACCATCCTCA 5422 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||||||||| | ||| || || || | || | ||| ||||| || Sbjct 5421 AGTTGCTTGCCGGCAAAGATGAGACGTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGG 5362 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | |||| | || || |||| ||| ||||| | || || ||||| Sbjct 5361 ATCTTGGTCTTGAC-GTTCTCGATAGTATCGGAACCTTCGACCTCAAGGGTGATGGTCTT 5303 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| |||||||||||||| Sbjct 5302 ACCAGTGAGGGTCTTGACGAAGATTTGCAT 5273 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| ||||||||||||||||||||||| ||| || | || || Sbjct 5025 ACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCGGAGAGAGTACGACCATCCTCA 4966 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||||||||| | ||| || || || | || | || ||||| || Sbjct 4965 AGTTGCTTGCCGGCAAAGATGAGACGTTGTTGGTCAGGTGGAATTCCCTCCTTGTCTTGG 4906 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | |||| | || || |||| || ||||||| ||||| ||||| Sbjct 4905 ATCTTGGTCTT-GACGTTCTCGATAGTATCGGAACCCTCGACCTCCAAGGTAATAGTCTT 4847 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || || || ||||||||||| Sbjct 4846 GCCTGTCAGAGTTTTAACAAAGATTTGCAT 4817 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| |||||||||||||||||| || | || || | || || Sbjct 5253 ACGAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGAGTACGACCATCCTCG 5194 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | ||| || || || | || | ||||||||| || Sbjct 5193 AGCTGCTTACCAGCGAAGATGAGACGTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGG 5134 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | || ||||| | || || ||||| Sbjct 5133 ATCTTGGTCTTGACATTCTCAATGGTGTCAGAACCCTCGACCTCAAGAGTGATGGTCTTA 5074 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| |||||||||||||| Sbjct 5073 CCAGTGAGGGTCTTAACGAAGATTTGCAT 5045 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| |||||||||||||||||| || | || || | || || Sbjct 5709 ACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAAAGGGTACGACCATCCTCA 5650 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || |||||||| | ||| || || || | || | ||| ||||| || Sbjct 5649 AGTTGCTTACCAGCAAAGATGAGACGTTGTTGGTCAGGTGGGATACCCTCCTTGTCTTGA 5590 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | || ||||| | || || ||||| Sbjct 5589 ATCTTGGTCTTGACATTCTCAATGGTGTCAGAACCCTCGACCTCGAGAGTGATGGTCTTA 5530 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | |||||| |||||||||||||| Sbjct 5529 CCAGTCAAGGTCTTGACGAAGATTTGCAT 5501 >seq60 Length=27343 Score = 95.1 bits (104), Expect = 9e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || |||||||||||||||||| || | || ||| | || || Sbjct 11533 ACCAAGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCCGAAAGGGTGCGACCATCCTCA 11592 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||| | ||| || || || | || | ||| ||||| || Sbjct 11593 AGTTGCTTACCGGCGAAGATAAGACGTTGTTGGTCGGGGGGGATACCCTCCTTGTCTTGG 11652 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| || | | |||| | |||||||| | | || ||||| | || || ||||| Sbjct 11653 ATCTT-GGCCTTGACGTTCTCGATGGTGTCAGAGCCCTCGACCTCGAGTGTGATGGTCTT 11711 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| || | ||||| |||||||| |||||| Sbjct 11712 TCCTGTCAATGTCTTAACGAAGATCTGCATG 11742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359931688040694