Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 5e-12 >seq3 Length=6357299 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 20961 CTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCG 21020 ||||| || | ||| | |||||| |||||||||||||| || || | || || | | Sbjct 5640669 CTGAGGACTAAATGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGAGAGAGTACGACCA 5640610 Query 21021 TCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTG 21080 || || | ||||| || || |||| | ||| || ||||| || | ||||| ||| Sbjct 5640609 TCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGGTCTGGTGGGATACCTTCTTTG 5640550 Query 21081 TCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATG 21140 || |||||| ||| || | | | | |||| | ||| ||| | || ||| Sbjct 5640549 TCTTGAATCTTTGTTTTAACATTTTCAATATTATCTGAGCCCTCAACTTCAAGAGTGATG 5640490 Query 21141 GTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || ||||| ||||||||||| |||||||| Sbjct 5640489 GTCTTACCAGTTAATGTTTTGACAAAGATTTGCAT 5640455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258989002356