Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 8e-13 >seq4 Length=5450249 Score = 89.7 bits (98), Expect = 8e-13 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 97991 TGGGTCCATTCAAAACATTACCATCATCCCGGAAGAGTTGCGCAGAA-TCTACAAGACTG 98049 ||| ||||||||| ||| |||||| || || ||| |||| |||| || || | Sbjct 1505679 TGGTTCCATTCAATCCATCGGTGGCATCCCTGATGATTTGAA-AGAACTCTATAAAACAG 1505737 Query 98050 TCTGGGAGATTCCGACCAAGA-CGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATT 98108 | ||||| || ||| | |||| | || |||||||||||||| || | |||| | ||| Sbjct 1505738 TTTGGGAAAT-CCGTCAAAGAACTCTCATCGATATGGCTGCTGATCGTGGTGCTTTCATC 1505796 Query 98109 GACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGTATGACTTCG 98168 || || |||||| |||||| | | | |||| || || |||| | | || || Sbjct 1505797 GATCAAAGTCAAAGTTTCAATGTTTTCATTGCTGAACCAACCTTTGCTAAACTCACCTCA 1505856 Query 98169 ATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCT 98218 || || || ||| ||||||| || || | ||||| || ||||||||||| Sbjct 1505857 ATGCATTTCTACTCATGGAAGAAAGGTTTAAAGACTGGTATGTACTATCT 1505906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058820207160