Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq3 82.4 6e-11 >seq3 Length=6357299 Score = 82.4 bits (90), Expect = 6e-11 Identities = 168/249 (67%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 18795 TTATAATATTTTATTGT--TTTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTC 18852 |||| |||||| || | ||||| |||| || ||||| || | || | ||||| || Sbjct 2332769 TTATTTTATTTTTTTTTAATTTCCACCTCTTAATCTTAATACTAAATGAAGAGTAGATTC 2332710 Query 18853 CTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAAT 18912 |||||||||||| ||||| | | || | | || || | |||||||| || |||| Sbjct 2332709 CTTTTGAATATTATAATCTGAAAGAGTACGGCCATCTTCTAATTGTTTACCTGCGAAAAT 2332650 Query 18913 AAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCC 18972 | ||| || ||||| || | |||||||| || ||||| ||| || | | Sbjct 2332649 TAATCTTTGTTGATCTGGTGGGATACCCTCTTTATCTTGGATTTTAGCTTTAACATTTTC 2332590 Query 18973 GACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAA 19032 | | |||| | || ||| | || ||||||||||| || | |||||| || || Sbjct 2332589 AATATTATCAGAACATTCAACTTCTAATGTGATGGTTTTACCAGTGAGAGTTTTAACGAA 2332530 Query 19033 AATTTGCAT 19041 ||||||||| Sbjct 2332529 AATTTGCAT 2332521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572592843154