Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq3 109 5e-19 seq6 100 2e-16 seq1 98.7 8e-16 seq5 95.1 1e-14 seq4 86.0 5e-12 >seq3 Length=6357299 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19979 TTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCG 20038 ||||| |||| ||| || | || ||||| ||||| ||||| ||||| ||||||||||| Sbjct 5641140 TTTCCACCTCTTAATCTGAGAACTAAATGGAGTGTTGATTCCTTTTGAATGTTGTAATCA 5641081 Query 20039 CCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACG 20098 | ||| | |||||| |||||||| || || |||| || | |||||||| Sbjct 5641080 GAAAGAGTACGACCATCTTCTAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCTGGT 5641021 Query 20099 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCC 20158 || | ||||||||||| ||||||| ||| || | ||| || | | ||| Sbjct 5641020 GGGATACCTTCTTTGTCTTGAATTTTTGTTTTTACATTCTCAATGTTGTCACTACCTTCA 5640961 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| | ||||||||||| || || | ||||| |||||||||||||| Sbjct 5640960 ACTTCGAGTGTAATGGTTTTACCAGTGAGAGTTTTTACAAAAATTTGCAT 5640911 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || | || ||||| || || ||||| ||||| ||||| || || Sbjct 5640225 CCACCTCTTAATCTAAGTACTAAATGGAGAGTGGATTCCTTTTGAATGTTATAGTCAGAG 5640166 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | ||||||||||||||| || ||| ||||||| | |||||||| || Sbjct 5640165 AGAGTACGACCATCTTCCAATTGTTTACCAGCAAAAATAAGACGTTGTTGATCTGGTGGG 5640106 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| |||||| || || | ||| | ||| | ||| | Sbjct 5640105 ATACCTTCTTTGTCTTGAATTTTAGCCTTTACATTTTCAATATTATCAGAACCTTCTACT 5640046 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || | |||||||| || || || | ||||| ||||||||||||||| Sbjct 5640045 TCAAGAGTAATGGTCTTTCCAGTAAGTGTTTTAACAAAAATTTGCATT 5639998 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || | || ||||| || || ||||| ||||| ||||||||||| Sbjct 5640909 CCACCTCTTAATCTGAGAACTAAATGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGAG 5640850 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | ||| ||||||||||| || || |||| || | |||||||| || Sbjct 5640849 AGAGTACGACCATCCTCCAATTGTTTACCGGCGAAAATGAGACGTTGTTGATCTGGTGGA 5640790 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| ||||| ||| || | ||| ||| | ||| | Sbjct 5640789 ATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTCTCAATGTTATCAGAACCTTCAACT 5640730 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | ||||| || || || || | |||||||||||||||||||| Sbjct 5640729 TCGAGTGTAATAGTCTTACCAGTGAGGGTTTTGACAAAAATTTGCAT 5640683 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||||| ||| || || || ||||| || |||||||| ||||| |||||||| || Sbjct 2332291 CCTCCTCTTAATCTTAATACTAAATGAAGAGTAGATTCCTTTTGAATGTTGTAGTCTGAT 2332232 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || ||| | || | || ||||| || || Sbjct 2332231 AAAGTACGACCATCTTCTAATTGTTTACCTGCAAAGATTAATCTTTGTTGGTCTGGTGGA 2332172 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATC---GCCAGGTTCC 20158 | |||||||| || |||||| ||| || | | | | ||| ||| ||| Sbjct 2332171 ATACCTTCTTTATCTTGAATTTTAGCTTTAACGTTCTCGATATTATCTGAGCC---TTCA 2332115 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| | || |||||||| || || | ||||| || ||||||||||| Sbjct 2332114 ACTTCTAATGTGATGGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 2332065 Score = 82.4 bits (90), Expect = 6e-11 Identities = 164/243 (67%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 19966 TATATTTTATCATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTG 20025 ||| |||| | | ||||| |||| ||| || || || ||||| || |||||||| ||||| Sbjct 2332763 TATTTTTTTTTAATTTCCACCTCTTAATCTTAATACTAAATGAAGAGTAGATTCCTTTTG 2332704 Query 20026 TATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCT 20085 || || ||||| | ||| |||||| |||||||| || || |||| | || Sbjct 2332703 AATATTATAATCTGAAAGAGTACGGCCATCTTCTAATTGTTTACCTGCGAAAATTAATCT 2332644 Query 20086 CTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGA 20145 |||||||| || | || ||||| || ||||| ||| || | ||| | Sbjct 2332643 TTGTTGATCTGGTGGGATACCCTCTTTATCTTGGATTTTAGCTTTAACATTTTCAATATT 2332584 Query 20146 ATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTG 20205 ||| | ||| ||| | || |||||||| || || | ||||| || |||||||| Sbjct 2332583 ATCAGAACATTCAACTTCTAATGTGATGGTTTTACCAGTGAGAGTTTTAACGAAAATTTG 2332524 Query 20206 CAT 20208 ||| Sbjct 2332523 CAT 2332521 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || | || ||||| || || ||||| ||||| ||||||||||| Sbjct 5640681 CCACCTCTTAATCTGAGGACTAAATGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGAG 5640622 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || || |||| | || ||||| || || Sbjct 5640621 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGGTCTGGTGGG 5640562 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATC---GCCAGGTTCC 20158 | ||||||||||| ||| ||| ||| || | ||| | ||| ||| || Sbjct 5640561 ATACCTTCTTTGTCTTGAATCTTTGTTTTAACATTTTCAATATTATCTGAGCC---CTCA 5640505 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| | || ||||| || || || || ||||||||||| |||||||| Sbjct 5640504 ACTTCAAGAGTGATGGTCTTACCAGTTAATGTTTTGACAAAGATTTGCAT 5640455 >seq6 Length=3602379 Score = 100 bits (110), Expect = 2e-16 Identities = 180/262 (69%), Gaps = 1/262 (0%) Strand=Plus/Minus Query 19947 TTTTATTATAAAATTTAAATATATTTTATCATTTTCCTCCTCGTAACCTCAACACCAAAT 20006 |||||||| | ||||| | | |||| | | ||||| |||| ||| || || || |||| Sbjct 961979 TTTTATTA-ATAATTTTTTTTTTTTTTTTTAATTTCCACCTCTTAATCTTAAAACTAAAT 961921 Query 20007 GTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTT 20066 | || || ||||||||||| || || || || | ||| | |||||| ||||||| Sbjct 961920 GAAGAGTTGATTCTTTTTGAATATTATAGTCTGAAAGAGTACGACCATCTTCTAATTGTT 961861 Query 20067 TGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTT 20126 | || || |||| | || |||||||| || | |||||||| || |||||| Sbjct 961860 TACCAGCGAAAATTAATCTTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATTTTGG 961801 Query 20127 GTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCA 20186 ||| || | ||| | ||| | ||| ||||| || || ||||| || || | Sbjct 961800 CTTTTACATTTTCAATATTATCTGAACCTTCAACTTCCAAAGTGATAGTTTTACCTGTTA 961741 Query 20187 ACGTTTTGACAAAAATTTGCAT 20208 | ||||| ||||| |||||||| Sbjct 961740 AAGTTTTAACAAAGATTTGCAT 961719 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || || || ||||| || || ||||||||||| || || ||||| Sbjct 961489 CCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAATCAGAG 961430 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || || |||| | || |||||||| ||| Sbjct 961429 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGGGGA 961370 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || |||||| ||| || | ||| | || | | ||| | Sbjct 961369 ATACCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCAATATTGTCACTACCTTCGACT 961310 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | || |||||||| || || | |||||||| ||||||||||| Sbjct 961309 TCTAATGTGATGGTTTTACCAGTAAGAGTTTTGACGAAAATTTGCAT 961263 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || || || ||||| || || ||||||||||| || |||||||| Sbjct 961717 CCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTGTAATCTGAA 961658 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || ||| |||| || | |||||||| || Sbjct 961657 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATGAGACGTTGTTGATCTGGTGGA 961598 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || |||||| ||| || | ||| |||| | ||| | Sbjct 961597 ATACCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCAATGTTGTCGCTACCTTCGACT 961538 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | || || ||||| || || | ||||| |||||||||||||| Sbjct 961537 TCTAATGTGATAGTTTTACCAGTGAGAGTTTTAACAAAAATTTGCAT 961491 Score = 89.7 bits (98), Expect = 4e-13 Identities = 166/243 (68%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || || || ||||| || || ||||||||||| || || || || Sbjct 961261 CCACCTCTTAATCTTAAAACTAAATGAAGAGTTGATTCTTTTTGAATATTATAGTCTGAA 961202 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || || |||| | || |||||||| ||| Sbjct 961201 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGGGGA 961142 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || ||| || ||| || | ||| | ||| | ||| | Sbjct 961141 ATACCTTCTTTATCTTGAATCTTGGCTTTAACATTTTCAATATTATCTGAACCTTCAACT 961082 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT--TTTAAACTCT 20219 || | ||| || ||||| || || | ||||| ||||||||||||||| || ||| | | Sbjct 961081 TCTAAGGTGATAGTTTTACCAGTGAGAGTTTTAACAAAAATTTGCATTCCTTAAAATTAT 961022 Query 20220 TAT 20222 ||| Sbjct 961021 TAT 961019 >seq1 Length=4923596 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || ||||| ||||| || |||||||||||||| || |||||||| Sbjct 2811992 CCACCTCTTAATCTTAACACTAAATGGAGAGTAGATTCTTTTTGAATATTGTAATCTGAT 2811933 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| |||||| |||||||| || || ||||||| | |||||||| || Sbjct 2811932 AAAGTACGGCCATCTTCTAATTGTTTACCGGCGAAAATAAGACGTTGTTGATCTGGTGGA 2811873 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || ||||| ||| || | | | | ||| | ||| | Sbjct 2811872 ATACCTTCTTTATCTTGGATTTTAGCTTTAACATTCTCGATATTATCAGAACCTTCAACT 2811813 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | || |||||||| ||||| | ||||| |||||||||||||| Sbjct 2811812 TCTAATGTGATGGTTTTACCGGTGAGAGTTTTAACAAAAATTTGCAT 2811766 Score = 93.3 bits (102), Expect = 4e-14 Identities = 170/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 19960 TTTAAATATATTTTATCATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTC 20019 ||||| | | |||| | | ||||| |||| ||| || || || ||||| || |||||||| Sbjct 2812242 TTTAATTTTTTTTTTTTAATTTCCACCTCTTAATCTTAAAACTAAATGGAGAGTAGATTC 2812183 Query 20020 TTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAAT 20079 |||||| || |||||||| | ||| | |||||| |||||||| || ||| |||| Sbjct 2812182 TTTTTGAATATTGTAATCTGATAAAGTACGACCATCTTCTAATTGTTTACCGGCAAAAAT 2812123 Query 20080 AAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCC 20139 | || |||||||| || | |||||||| || || || ||| || | | Sbjct 2812122 TAATCTTTGTTGATCTGGTGGAATACCTTCTTTATCTTGGATCTTGGCTTTAACATTTTC 2812063 Query 20140 AACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAA 20199 || ||| | ||| ||| | || || ||||| || || | ||||| ||||| Sbjct 2812062 AATGTTATCAGAACCTTCAACTTCTAATGTTATTGTTTTACCAGTGAGAGTTTTAACAAA 2812003 Query 20200 AATTTGCAT 20208 |||||||| Sbjct 2812002 GATTTGCAT 2811994 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || || || ||||| || || ||||| ||||| || |||||||| Sbjct 2811536 CCACCTCTTAATCTTAATACTAAATGAAGAGTTGATTCCTTTTGAATATTGTAATCTGAT 2811477 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| |||||| |||||||| || ||| |||| | || |||||||| || Sbjct 2811476 AAAGTACGGCCATCTTCTAATTGTTTACCGGCAAAAATTAATCTTTGTTGATCTGGTGGA 2811417 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || |||||| ||| || | ||| | ||| | ||| | Sbjct 2811416 ATACCTTCTTTATCTTGAATTTTAGCTTTAACATTCTCAATATTATCAGAACCTTCAACT 2811357 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || | || || ||||| || || | ||||| ||||||||||||||| Sbjct 2811356 TCTAATGTTATTGTTTTACCAGTAAGAGTTTTAACAAAAATTTGCATT 2811309 >seq5 Length=5125352 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || | || ||||| || || ||||||||||| ||||||||||| Sbjct 2812340 CCACCTCTTAATCTGAGAACTAAATGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAG 2812281 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| |||||| |||||||| || || |||| || | |||||||| || Sbjct 2812280 AGAGTACGGCCATCTTCTAATTGTTTACCAGCGAAAATGAGACGTTGTTGATCTGGTGGA 2812221 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| ||||| ||| || | ||| ||| | | ||| | Sbjct 2812220 ATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGTTATCACTACCTTCGACT 2812161 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| ||| |||||||| || || | ||||| ||||| |||||||| Sbjct 2812160 TCCAAGGTGATGGTTTTACCAGTGAGAGTTTTAACAAAGATTTGCAT 2812114 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19979 TTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCG 20038 || || |||| ||| || | || ||||| || || ||||| ||||| ||||||||||| Sbjct 2812799 TTACCACCTCTTAATCTGAGAACTAAATGGAGAGTGGATTCCTTTTGAATGTTGTAATCA 2812740 Query 20039 CCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACG 20098 | ||| | |||||| |||||||| || || |||| || | |||||||| Sbjct 2812739 GAGAGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATGAGACGTTGTTGATCTGGT 2812680 Query 20099 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCC 20158 || | ||||||||||| ||||| ||| || | ||| ||| | | ||| Sbjct 2812679 GGAATACCTTCTTTGTCTTGGATTTTGGCTTTAACATTTTCAATGTTATCACTACCTTCG 2812620 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| ||| || ||||| || || || ||||| ||||| |||||||| Sbjct 2812619 ACTTCCAAGGTGATAGTTTTACCTGTTAAAGTTTTAACAAAGATTTGCAT 2812570 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || | || ||||| || || ||||| ||||| ||||||||||| Sbjct 2811428 CCACCTCTTAATCTAAGAACTAAATGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGAA 2811369 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || ||| | || | || |||||||| || Sbjct 2811368 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCTGGTGGA 2811309 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| |||||| || || | ||| || | | ||| | Sbjct 2811308 ATACCTTCTTTGTCTTGAATTTTAGCCTTGACATTTTCAATGTTGTCACTACCTTCAACT 2811249 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAA 20214 |||| || |||||||| || || | ||||| |||||||||||||| |||| Sbjct 2811248 TCCAATGTGATGGTTTTACCAGTGAGAGTTTTAACAAAAATTTGCATAATTAA 2811196 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || || || ||||| || || ||||||||||| |||||||| || Sbjct 2812112 CCACCTCTTAATCTTAAAACTAAATGGAGAGTGGATTCTTTTTGGATGTTGTAGTCAGAG 2812053 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || || |||| | || |||||||| || Sbjct 2812052 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGTGGG 2811993 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| ||||| ||| || | ||| ||| | | ||| Sbjct 2811992 ATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGTTATCACTACCTTCAACC 2811933 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | ||| ||||| || || || | ||||| |||||||||||||| Sbjct 2811932 TCTAAGGTGATGGTCTTACCAGTGAGAGTTTTAACAAAAATTTGCAT 2811886 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || | ||||| || || || ||||| ||||| |||||||| || Sbjct 2811656 CCACCTCTTAATCTGAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTCAGAG 2811597 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || || |||| | || |||||||| || Sbjct 2811596 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGTGGG 2811537 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| |||||| ||| || | ||| ||| | | ||| Sbjct 2811536 ATACCTTCTTTGTCTTGAATTTTAGCTTTAACATTTTCAATGTTATCACTACCTTCAACC 2811477 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | ||| |||||||| || || | ||||| ||||| |||||||| Sbjct 2811476 TCTAAGGTGATGGTTTTACCAGTGAGAGTTTTTACAAAGATTTGCAT 2811430 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || | || ||||| || || ||||| ||||| || ||||| || Sbjct 2812568 CCACCTCTTAATCTGAGAACTAAATGGAGAGTGGATTCCTTTTGAATATTGTAGTCAGAG 2812509 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || || |||| | || |||||||| || Sbjct 2812508 AGAGTACGACCATCTTCTAATTGTTTACCAGCGAAAATTAATCTTTGTTGATCTGGTGGA 2812449 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| |||||| ||| || | ||| ||| | ||| | Sbjct 2812448 ATACCTTCTTTGTCTTGAATTTTGGCTTTGACATTTTCAATGTTATCAGAACCTTCGACT 2812389 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || ||||| || || ||||| ||||| ||||| |||||||| Sbjct 2812388 TCCAATGTGATGGTCTTACCAGTCAAGGTTTTTACAAAGATTTGCAT 2812342 >seq4 Length=5450249 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| || || || || || || || ||||||||||| || |||||||| Sbjct 5083938 CCACCTCTTAATCTTAAAACTAAGTGGAGAGTTGATTCTTTTTGAATATTGTAATCAGAG 5083997 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| |||||||| || ||| |||| || | |||||||| || Sbjct 5083998 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAAATGAGACGTTGTTGATCTGGTGGA 5084057 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || |||||| ||| || | ||| | ||| ||| Sbjct 5084058 ATACCTTCTTTATCTTGAATTTTGGCTTTAACATTTTCAATATTATCAGATCCTTCAACC 5084117 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| ||| || ||||| || || | ||||| ||||| |||||||| Sbjct 5084118 TCCAAGGTGATAGTTTTACCAGTGAGAGTTTTAACAAAGATTTGCAT 5084164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419586990337521