Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4 178 2e-39 >seq4 Length=5450249 Score = 178 bits (196), Expect = 2e-39 Identities = 1110/1762 (63%), Gaps = 52/1762 (3%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || || |||||||| || ||||| | || | |||||| | || | |||||| |||| Sbjct 1505909 CGAAGATAGTACATACCAGTCTTTAAACCTTTCTTCCATGAGTAGAAATGCATTGAGGTG 1505850 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | || | | ||||| | ||||| | || | |||||| |||||||||||| Sbjct 1505849 AGTTTAGCAAAGGTTGGTTCAGCAATGAAAACATTGAAACTTTGACTTTGATCGATGAAA 1505790 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTCCCACACAGTTCT 113775 |||||||| || |||||||| || | | | ||| | ||||||||| || ||| | Sbjct 1505789 GCACCACGATCAGCAGCCATATCGATGAGAGTTCTTTGACG-GATTTCCCAAACTGTTTT 1505731 Query 113776 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTT 113835 ||||| | || | |||||| ||||| | |||| ||| ||||| |||| || Sbjct 1505730 ATAGAGTTCTTTCAAATCATCAGGGATGCCACCGATGGATTGAATGGAACCACGTGCAGC 1505671 Query 113836 GACCATGAGATCCTTCATATCCTTTGACCAGA-GACCAATCTTTTTGAGATCCTCCACGA 113894 || || ||| |||||| || |||||| | | ||||| | ||||||| || | | Sbjct 1505670 AACGATTTGATTCTTCATCTCTGGTGACCAAATGCCCAAT-TCCATGAGATCTTCGAGTA 1505612 Query 113895 GATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCG 113954 || || ||||||| || ||||| || | || | || || |||| | Sbjct 1505611 ATTGTTTGTTGACAATTGTGAATTCACCTGCTAAAACACGACGACTGTAAATGTTGGAAG 1505552 Query 113955 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGG 114014 |||| || |||||||| ||||||||||| | |||||| || || || || ||||| | Sbjct 1505551 TGTAAGGTTCAAAGCATTCATTGTTACCAAGGATTTGACTTGTTGAAGCGGTTGGCATTG 1505492 Query 114015 GTGCCATGAGAAGGCTGTTACGGA---GACCCTTTTCCCTAATGCGTTCCTTGAGGGC-G 114070 |||| ||||| || ||||| | |||||| | |||| ||||| || | | Sbjct 1505491 GTGCAATGAGGAGTGAATTACGTAAACCACCCTTATTGACAATGTTATCCTTTAGCTCTG 1505432 Query 114071 TCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130 || | || | || ||| || | | | |||||||||||| ||||||||||||| | Sbjct 1505431 CCCAATTCCAACGAGAACTTGGTGT-AACATTCCACATATCAAATTGGAGGATACCTTTG 1505373 Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTC-GGAGCT 114189 || ||||| || || | || | || || | || ||| ||||||||| ||| Sbjct 1505372 GAAGCTGGTGAACCTTTGAAAGATTCATAGGTACCATCACGGATCGCCAATTCATGAG-A 1505314 Query 114190 CGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTC 114249 || | || || || || || || || | |||| | | ||| | Sbjct 1505313 GGCAGTCAAAGCGGCAAAGTAAATGGTTTCGGCGATTTCAACATTTAATTTAGCGGCGGC 1505254 Query 114250 GTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 114309 | ||| || | | || ||| || ||||| || | |||||| | ||| | Sbjct 1505253 AACACTATCGAAAGGCATACGCATTTTAATGAAAACATCGGCCAAACCTTGAATACCAAT 1505194 Query 114310 GCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCT 114369 |||||||| |||||||| | ||| || || ||| |||| |||||| | || | Sbjct 1505193 ACCAATTGGACGATGTCTAAGATTTGAAGTTTTAGCCTCAGCCACTGGATAATAGTTACG 1505134 Query 114370 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA---------TGAAG 114420 |||||| | || ||||| ||| | | ||||||||||||| ||| | Sbjct 1505133 ATCGATGATAACGTTAAGATTGACGGTTATTAACTTTGTGATTTCAAATAGGAATTGATG 1505074 Query 114421 --------CTTTTCGTAATCAAAACTGCGAGTCTCTTCATTG----ACATACTTAGGAAG 114468 ||||| | | | ||| || | ||| ||| |||| ||||| Sbjct 1505073 GTCAAACTCTTTTTCTTTTGGATCGGTTGAGCCTACTTTTTGACGAACAAACTTTGGAAG 1505014 Query 114469 GGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCA-GTGTACTCTATAATTT 114527 || || || || |||||||| || | | | |||| || | | ||||| | || || | Sbjct 1505013 TGCTATAGAGGCAAGATTACAAACGGCGATTTCAT-CTGGTGATGTGTATTGAATGATCT 1504955 Query 114528 CCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 114587 | ||||| | ||| ||| ||||||| || || ||||||||||| || || | |||| Sbjct 1504954 CGGTACAAAGATTACTACTACTAATGGTACCTAAATTCTTTTGATTGGATTTAGCATTAC 1504895 Query 114588 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 114647 | ||||||||||| | ||| |||| || || || || ||| |||| | ||| || Sbjct 1504894 AGGCATCCTTGTACAAAATGAATGGAGTACCAGTTTCAACTTGAGACTCCATAATGGCGA 1504835 Query 114648 TCCAGACATCGGCGGC-----TGGCACAGTGGCGTTGGCTCGCCCCTCCT-CCTCGTACT 114701 ||| | || || || ||| | | | || | | | | ||||| | Sbjct 1504834 ACCAAAGTTCTTGAGCTTTAATGACAC---GTCTTGGGAGGTCAGGTGTTGCTTCGTATT 1504778 Query 114702 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 114761 | ||||| || | || || | || | || |||||||| | || || Sbjct 1504777 TCAAATAGAGAGCACGATGTTCCTCTGAGTGAGTTTCAGCAAGACCTGGTGCTTCATTTG 1504718 Query 114762 GGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCC 114821 | || ||||| | ||| | ||| | || ||||| | ||| || | || | || Sbjct 1504717 GACAAAAGAGGGCCCAATCGCCATTTTGTTCGACACGTTCCATAAAAATATCACTAACCC 1504658 Query 114822 AGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 114881 | ||||| |||| ||||| | | | ||||| | || || | | Sbjct 1504657 AAAGAGCATAGAATAGATCTCTAGCTCTCATCTCTTCCTTACCAGTGTTTTTCTTTAGAT 1504598 Query 114882 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTAC 114941 | | ||| || | || ||| |||||||| ||||||| ||| || || | | ||||| | Sbjct 1504597 CAATAAATTCAAAGACATCAGCGTGCCATGGTTCCAAGTAAACGGCAAAGGCACCCTTTC 1504538 Query 114942 ---GACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAA 114998 | |||| | || | || || | || || |||| || || ||||||||||| | Sbjct 1504537 TCTTGCCACCACCTTGATCGACGTAACGAGCAGTATCATTGAAAACACGAAGCATTGGCA 1504478 Query 114999 TGATACCATCAGATTG-GCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCA 115057 | ||||| | ||| ||||| || || |||||| | | | || | | | | Sbjct 1504477 CCAAACCAT-TGCTTGTACCATTGGTACCACGAATATAACTTTGAGCAGCACGAATCTTA 1504419 Query 115058 TGGATGTGC-ATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 115116 | || ||| ||||||||||| || || | |||||| || | || || | | | | | Sbjct 1504418 T-GAACTGCAATACCAATACCACCGGCACTCTTTGAAATGAGTGCACATTGTTTCAAAGT 1504360 Query 115117 GCCGTAGATCCCGTCGATCGAGTCACCCTT-ATTTGCGATAAGGAAGCAGCTCGACATTT 115175 | | || || || ||||| || || |||| ||||| ||| || || | ||||||| Sbjct 1504359 GTCATAAATACCATCGATTGAATCCTCCTTCATTTGAACCAAGAAACAAGAT-GACATTT 1504301 Query 115176 GTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGG 115235 |||| ||||||||| |||||||| || |||||||| || || |||||| | | Sbjct 1504300 GTGGTGATGGTGTACCTGCGTTGAATAGAGTTGGTGTGGCATGAGTGAACAATTTCTCAG 1504241 Query 115236 ACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGA 115295 ||| | |||||| | | | | | | |||||| || || ||||| || |||| Sbjct 1504240 ACAAACGTTTGTAGGTGTTGATGGCAGATTCGAGGTCTTCGCCATGGATACCAATGGAGA 1504181 Query 115296 CCCGCATAAACATGTATTGGGG 115317 | ||||| ||||||| ||| || Sbjct 1504180 CACGCATCAACATGTGTTGTGG 1504159 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/202 (72%), Gaps = 7/202 (3%) Strand=Plus/Plus Query 10876 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCG---C 10932 ||| |||||||| ||| ||| | |||||| | || | || ||||||||||||| | Sbjct 1752721 AAAACCATCCATTTCAACCAACAATTGATTTAATGTATTCTCACGTTCATCATTCGAACC 1752780 Query 10933 GGGCATACCACCCGCACTGCGTTGCT-TACCGACGGCGTCAATTTCATCGATGAAAACGA 10991 | | |||||| || | ||||| |||| || || ||||||||||||||||| || | Sbjct 1752781 AGAGAAACCACCTTTACCTC-TTGCTCTACCAACTGCATCAATTTCATCGATGAATACAA 1752839 Query 10992 TACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGGACTC-TCTTGGCACCGACA 11050 |||| ||| ||| | | || |||||| | ||||| || | | ||| ||| ||| Sbjct 1752840 TACATGGTGCATTCTTTCTAGCCTGTTCAAATAGATCTCTAACACGTGATGG-ACCAACA 1752898 Query 11051 CCCACAAACATTTCCACAAAAT 11072 || |||||||| || || |||| Sbjct 1752899 CCAACAAACATCTCTACGAAAT 1752920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353293856280