Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dictyostelium_20discoideum_20[refseq_20GCF_5F000004695.1_202009-08- 24] 41 sequences; 34,204,973 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4 107 2e-18 >seq4 Length=5450249 Score = 107 bits (118), Expect = 2e-18 Identities = 308/472 (65%), Gaps = 14/472 (3%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||||| || || || |||||||| || || || ||||| ||||| || |||||| || Sbjct 1504261 GCCACACCAACTCTATTCAACGCAGGTACACCATCACCACAAATGTCATCTTGTTTCTTG 1504320 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | | |||| || || ||| || |||| |||| | || | ||||| | Sbjct 1504321 GTTCAAATGAAGGAGGATTCAATCGATGGTATTTATGACACTTTGAAACAATGTGCACTC 1504380 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 || ||||| || || || || || || || || | | ||||| | || Sbjct 1504381 ATTTCAAAGAGTGCCGGTGGTATTGGTATTGCAGTTCATAAGATTCGTGCT----GCTCA 1504436 Query 94072 ----TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTT 94127 || || || ||||||||||| || ||| || | || || ||||| || || || Sbjct 1504437 AAGTTATATTCGTGGTACCAATGGTACAAGCAATGGTTTGGTGCCAATGCTTCGTGTTTT 1504496 Query 94128 CAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGT 94187 ||| | | || || ||||| || || |||||||| | ||| |||||| | || || || Sbjct 1504497 CAATGATACTGCTCGTTACGTCGATCAAGGTGGTGGCAAGAGAAAGGGTGCCTTTGCCGT 1504556 Query 94188 CTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCAC-- 94245 || | || || |||||||| || || | || || || || |||||| || Sbjct 1504557 TTACTTGGAACCATGGCACGCTGATGTCTTTGAATTTATTGATCT---AAAGAAAAACAC 1504613 Query 94246 -GGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTT 94304 || || || | ||| || ||||| || ||||| ||||| ||||| || |||| Sbjct 1504614 TGGTAAGGAAGAGATGAGAGCTAGAGATCTATTCTATGCTCTTTGGGTTAGTGATATTTT 1504673 Query 94305 TATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAA 94356 |||| |||| ||||| |||| || ||| || |||||||| |||||| Sbjct 1504674 TATGGAACGTGTCGAACAAAATGGCGATTGGGCCCTCTTTTGTCCAAATGAA 1504725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722946454360